CEA/DSV/IBeB/SBVME/LEMiRE - P2TF Database - Version 2.9
 

Genomes

Species search
Taxonomy tree-browser
Organism Lineage Transcription Factor misPredicted TF protein
Octadecabacter arcticus 238 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Octadecabacter. / 187 29
Octadecabacter antarcticus 307 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Octadecabacter. / 240 14
Pseudovibrio sp. FO-BEG1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Pseudovibrio. / 363 9
Paracoccus aminophilus JCM 7686 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 194 9
Leisingera methylohalidivorans DSM 14336 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Leisingera. / 263 8
Phaeobacter gallaeciensis 2.10 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 230 7
Ketogulonicigenium vulgare Y25 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ketogulonicigenium. / 149 5
Paracoccus denitrificans PD1222 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 168 5
Rhodobacter sphaeroides 2.4.1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 144 5
Roseobacter denitrificans OCh 114 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Roseobacter. / 196 5
Phaeobacter gallaeciensis DSM 17395 = CIP 105210 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 227 5
Jannaschia sp. CCS1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Jannaschia. / 262 4
Rhodobacter sphaeroides KD131 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 84 4
Ruegeria pomeroyi DSS-3 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ruegeria. / 279 4
Phaeobacter gallaeciensis DSM 26640 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 234 4
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 16 3
Rhodobacter sphaeroides ATCC 17029 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 73 3
Rhodobacter sphaeroides KD131 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 143 3
Roseobacter litoralis Och 149 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Roseobacter. / 247 3
Leisingera methylohalidivorans DSM 14336 plasmid unnamed Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Leisingera. / 23 3
Hyphomonas neptunium ATCC 15444 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Hyphomonadaceae / Hyphomonas. / 185 2
Rhodobacter sphaeroides ATCC 17025 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 147 2
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 53 2
Rhodobacter sphaeroides ATCC 17029 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 144 2
Ruegeria pomeroyi DSS-3 plasmid megaplasmid Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ruegeria. / 55 2
Ruegeria sp. TM1040 plasmid mega plasmid Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ruegeria. / 69 2
Ketogulonigenium vulgarum WSH-001 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ketogulonicigenium. / 152 2
Paracoccus aminophilus JCM 7686 plasmid pAMI4 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 42 2
Dinoroseobacter shibae DFL 12 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Dinoroseobacter. / 191 1
Dinoroseobacter shibae DFL 12 plasmid pDSHI01 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Dinoroseobacter. / 12 1
Maricaulis maris MCS10 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Hyphomonadaceae / Maricaulis. / 174 1
Paracoccus denitrificans PD1222 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 129 1
Rhodobacter capsulatus SB 1003 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 178 1
Rhodobacter sphaeroides 2.4.1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 55 1
Rhodobacter sphaeroides 2.4.1 plasmid A Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 6 1
Rhodobacter sphaeroides 2.4.1 plasmid B Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 12 1
Rhodobacter sphaeroides 2.4.1 plasmid C Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 6 1
Rhodobacter sphaeroides 2.4.1 plasmid D Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 7 1
Rhodobacter sphaeroides 2.4.1 plasmid E Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 5 1
Rhodobacter sphaeroides KD131 plasmid pRSKD131B Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 6 1
Roseobacter denitrificans OCh 114 plasmid pTB1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Roseobacter. / 6 1
Roseobacter litoralis Och 149 plasmid pRLO149_83 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Roseobacter. / 7 1
Phaeobacter gallaeciensis 2.10 plasmid pPGA2_239 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 23 1
Phaeobacter gallaeciensis DSM 17395 = CIP 105210 plasmid pPGA1_78 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 11 1
Dinoroseobacter shibae DFL 12 plasmid pDSHI02 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Dinoroseobacter. / 8 0
Dinoroseobacter shibae DFL 12 plasmid pDSHI03 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Dinoroseobacter. / 13 0
Dinoroseobacter shibae DFL 12 plasmid pDSHI04 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Dinoroseobacter. / 4 0
Dinoroseobacter shibae DFL 12 plasmid pDSHI05 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Dinoroseobacter. / 6 0
Hirschia baltica ATCC 49814 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Hyphomonadaceae / Hirschia. / 156 0
Hirschia baltica ATCC 49814 plasmid pHbal01 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Hyphomonadaceae / Hirschia. / 5 0
Jannaschia sp. CCS1 plasmid plasmid1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Jannaschia. / 2 0
Ketogulonicigenium vulgare Y25 plasmid pYP1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ketogulonicigenium. / 15 0
Ketogulonicigenium vulgare Y25 plasmid pYP12 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ketogulonicigenium. / 24 0
Paracoccus denitrificans PD1222 plasmid 1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 65 0
Pseudovibrio sp. FO-BEG1 plasmid unnamed Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Pseudovibrio. / 38 0
Rhodobacter capsulatus SB 1003 plasmid pRCB133 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 17 0
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 9 0
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA04 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 3 0
Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 11 0
Rhodobacter sphaeroides KD131 plasmid pRSKD131A Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. / 14 0
Roseobacter denitrificans OCh 114 plasmid pTB3 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Roseobacter. / 1 0
Roseobacter litoralis Och 149 plasmid pRLO149_94 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Roseobacter. / 4 0
Ruegeria sp. TM1040 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ruegeria. / 195 0
Ruegeria sp. TM1040 plasmid unnamed Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ruegeria. / 8 0
Ketogulonigenium vulgarum WSH-001 plasmid 1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ketogulonicigenium. / 16 0
Ketogulonigenium vulgarum WSH-001 plasmid 2 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Ketogulonicigenium. / 24 0
Octadecabacter antarcticus 307 plasmid pOA307_63 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Octadecabacter. / 7 0
Octadecabacter arcticus 238 plasmid pOA238_118 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Octadecabacter. / 4 0
Octadecabacter arcticus 238 plasmid pOA238_160 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Octadecabacter. / 11 0
Paracoccus aminophilus JCM 7686 plasmid pAMI1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 13 0
Paracoccus aminophilus JCM 7686 plasmid pAMI5 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 25 0
Paracoccus aminophilus JCM 7686 plasmid pAMI6 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 17 0
Paracoccus aminophilus JCM 7686 plasmid pAMI8 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Paracoccus. / 15 0
Phaeobacter gallaeciensis 2.10 plasmid pPGA2_71 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 2 0
Phaeobacter gallaeciensis 2.10 plasmid pPGA2_95 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 11 0
Phaeobacter gallaeciensis DSM 17395 = CIP 105210 plasmid pPGA1_262 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 31 0
Phaeobacter gallaeciensis DSM 17395 = CIP 105210 plasmid pPGA1_65 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 2 0
Leisingera methylohalidivorans DSM 14336 plasmid unnamed Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Leisingera. / 23 0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_A255 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 23 0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_B134 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 8 0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_C110 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 15 0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_D78 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 11 0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 1 0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_F69 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 2 0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_G40 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. / 6 0


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Date : 10 November 2024, 20:22:06 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales