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Taxonomy tree-browser

Organism	Lineage	Transcription Factor	misPredicted TF protein
Lactobacillus brevis ATCC 367 plasmid 1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC02	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC03	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus casei ATCC 334	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	173	0
Lactobacillus casei ATCC 334 plasmid 1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus casei str. Zhang	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	184	0
Lactobacillus casei str. Zhang plasmid plca36	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	65	0
Lactobacillus delbrueckii subsp. bulgaricus ND02 plasmid unnamed	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus johnsonii FI9785	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	78	0
Lactobacillus johnsonii FI9785 plasmid p9785L	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus kefiranofaciens ZW3 plasmid pWW1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	7	0
Lactobacillus kefiranofaciens ZW3 plasmid pWW2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus plantarum subsp. plantarum ST-III plasmid pST-III	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	5	0
Lactobacillus plantarum WCFS1 plasmid pWCFS103	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	4	0
Lactobacillus reuteri DSM 20016	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	96	0
Lactobacillus reuteri SD2112 plasmid pLR581	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus reuteri SD2112 plasmid pLR584	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus reuteri SD2112 plasmid pLR585	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus rhamnosus Lc 705	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	201	0
Lactobacillus rhamnosus Lc 705 plasmid pLC1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus sakei subsp. sakei 23K	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	138	0
Lactobacillus salivarius UCC118 plasmid pMP118	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	18	0
Lactobacillus salivarius UCC118 plasmid pSF118-20	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus salivarius UCC118 plasmid pSF118-44	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	73	0
Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	5	0
Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Pediococcus pentosaceus ATCC 25745	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	125	0
Lactobacillus helveticus H10 plasmid pH10	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-3	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-4	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-5	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	3	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-6	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	3	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-8	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	2	0
Lactobacillus brevis KB290 plasmid pKB290-1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus brevis KB290 plasmid pKB290-2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus brevis KB290 plasmid pKB290-4	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus brevis KB290 plasmid pKB290-5	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus brevis KB290 plasmid pKB290-9	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus buchneri CD034 plasmid pCD034-3	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	6	0
Lactobacillus casei LOCK919 plasmid pLOCK919	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	12	0
Lactobacillus plantarum 16 plasmid Lp16D	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum 16 plasmid Lp16F	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	4	0
Lactobacillus plantarum 16 plasmid Lp16G	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum 16 plasmid Lp16H	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum 16 plasmid Lp16L	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	5	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp3	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp6	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus plantarum ZJ316 plasmid pLP-ZJ101	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus plantarum ZJ316 plasmid pLP-ZJ102	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum ZJ316 plasmid pLP-ZJ103	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	6	0
Lactobacillus reuteri I5007 plasmid pLRI01	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	7	0
Lactobacillus reuteri I5007 plasmid pLRI02	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus reuteri I5007 plasmid pLRI03	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus reuteri I5007 plasmid pLRI04	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus reuteri I5007 plasmid pLRI05	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus brevis ATCC 367	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	163	1
Lactobacillus buchneri NRRL B-30929	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	132	1
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	1
Lactobacillus casei BL23	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	206	1
Lactobacillus crispatus ST1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	117	1
Lactobacillus plantarum JDM1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	237	1
Lactobacillus amylovorus GRL1118 plasmid plasmid2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	5	1
Lactobacillus rhamnosus ATCC 8530	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	197	1
Lactobacillus salivarius CECT 5713 plasmid pHN2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	1
Pediococcus claussenii ATCC BAA-344	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	116	1
Lactobacillus brevis KB290 plasmid pKB290-3	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	1
Lactobacillus plantarum 16	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	225	1
Lactobacillus plantarum 16 plasmid Lp16C	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	1
Lactobacillus plantarum 16 plasmid Lp16E	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	1
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp5	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	1
Lactobacillus reuteri I5007	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	99	1
Pediococcus pentosaceus SL4	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Pediococcus. /	116	1
Lactobacillus brevis ATCC 367 plasmid 2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	2
Lactobacillus johnsonii NCC 533	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	109	2
Lactobacillus rhamnosus GG	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	193	2
Lactobacillus ruminis ATCC 27782	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	87	2
Lactobacillus sanfranciscensis TMW 1.1304	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	49	2
Lactobacillus casei BD-II plasmid pBD-II	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	2
Lactobacillus casei LC2W plasmid pLC2W	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	2
Lactobacillus johnsonii DPC 6026	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	98	2
Lactobacillus acidophilus La-14	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	109	2
Lactobacillus brevis KB290	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	181	2
Lactobacillus casei W56 plasmid pW56	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	2
Lactobacillus plantarum 16 plasmid Lp16I	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	2
Lactobacillus plantarum ZJ316	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	236	2
Lactobacillus reuteri TD1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	96	2
Lactobacillus acidophilus NCFM	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	107	3
Lactobacillus gasseri ATCC 33323	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	98	3
Lactobacillus plantarum subsp. plantarum ST-III	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	242	3
Lactobacillus plantarum WCFS1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	250	3
Lactobacillus amylovorus GRL1118	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	93	3
Lactobacillus salivarius CECT 5713 plasmid pHN1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	3
Lactobacillus paracasei subsp. paracasei 8700:2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	390	3
Lactobacillus plantarum subsp. plantarum P-8	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	213	3
Lactobacillus casei LC2W	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	205	4
Lactobacillus rhamnosus LOCK908	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	193	4
Lactobacillus reuteri SD2112	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	160	5
Lactobacillus rhamnosus GG	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	189	5
Lactobacillus johnsonii N6.2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	92	5
Lactobacillus amylovorus GRL 1112	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	89	6
Lactobacillus delbrueckii subsp. bulgaricus ND02	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	110	6
Lactobacillus kefiranofaciens ZW3	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	99	6
Lactobacillus casei BD-II	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	206	6
Lactobacillus buchneri CD034	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	131	6
Lactobacillus fermentum F-6	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	96	6
Lactobacillus rhamnosus LOCK900	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	189	6
Lactobacillus acidophilus 30SC	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	100	7
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	75	8
Lactobacillus salivarius CECT 5713 plasmid pHN3	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	11	8
Lactobacillus casei W56	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	206	8
Lactobacillus reuteri JCM 1112	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	88	10
Lactobacillus helveticus H10	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	94	11
Lactobacillus casei LOCK919	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	204	12
Lactobacillus fermentum IFO 3956	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	105	14
Lactobacillus helveticus DPC 4571	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	70	14
Lactobacillus delbrueckii subsp. bulgaricus 2038	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	78	14
Lactobacillus helveticus R0052	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	82	20
Lactobacillus helveticus CNRZ32	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	77	22
Lactobacillus salivarius CECT 5713	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	60	31
Lactobacillus fermentum CECT 5716	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	39	74