CEA/DSV/IBeB/SBVME/LEMiRE - P2TF Database - Version 2.9
 

Genomes

Species search

Taxonomy tree-browser
Organism Lineage Transcription Factor misPredicted TF protein
Aliivibrio salmonicida LFI1238 plasmid pVSAL840 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 3 0
Aliivibrio salmonicida LFI1238 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 59 1
Aliivibrio salmonicida LFI1238 plasmid pVSAL320 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 2 0
Aliivibrio salmonicida LFI1238 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 123 5
Bacteriovorax marinus SJ Bacteria / Proteobacteria / Deltaproteobacteria / Bdellovibrionales / Bacteriovoracaceae / Bacteriovorax. / 98 0
Bdellovibrio bacteriovorus str. Tiberius Bacteria / Proteobacteria / Deltaproteobacteria / Bdellovibrionales / Bdellovibrionaceae / Bdellovibrio. / 129 5
Bdellovibrio bacteriovorus HD100 Bacteria / Proteobacteria / Deltaproteobacteria / Bdellovibrionales / Bdellovibrionaceae / Bdellovibrio. / 116 0
Bdellovibrio exovorus JSS Bacteria / Proteobacteria / Deltaproteobacteria / Bdellovibrionales / Bdellovibrionaceae / Bdellovibrio. / 102 1
Desulfovibrio aespoeensis Aspo-2 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 139 0
Desulfovibrio africanus str. Walvis Bay Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 140 2
Desulfovibrio alaskensis G20 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 138 1
Desulfomicrobium baculatum DSM 4028 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfomicrobiaceae / Desulfomicrobium. / 147 2
Desulfovibrio desulfuricans ND132 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 151 0
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 85 1
Desulfovibrio gigas DSM 1382 = ATCC 19364 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 109 7
Desulfovibrio gigas DSM 1382 = ATCC 19364 plasmid unnamed Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 2 0
Desulfovibrio hydrothermalis AM13 = DSM 14728 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 107 0
Desulfovibrio magneticus RS-1 plasmid pDMC1 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 4 0
Desulfovibrio magneticus RS-1 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 189 3
Desulfovibrio piezophilus C1TLV30 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 143 3
Desulfohalobium retbaense DSM 5692 plasmid pDRET01 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfohalobiaceae / Desulfohalobium. / 5 1
Desulfohalobium retbaense DSM 5692 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfohalobiaceae / Desulfohalobium. / 88 1
Desulfovibrio salexigens DSM 2638 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 167 1
Desulfovibrio vulgaris DP4 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 120 2
Desulfovibrio vulgaris DP4 plasmid pDVUL01 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 8 0
Desulfovibrio vulgaris str. Hildenborough Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 124 4
Desulfovibrio vulgaris str. Hildenborough plasmid pDV Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 8 0
Desulfovibrio vulgaris RCH1 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 128 1
Desulfovibrio vulgaris RCH1 plasmid pDEVAL01 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 8 0
Desulfovibrio vulgaris str. Miyazaki F Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 151 4
Lawsonia intracellularis PHE/MN1-00 plasmid 2 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. / 1 0
Lawsonia intracellularis PHE/MN1-00 plasmid 3 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. / 2 0
Lawsonia intracellularis N343 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. / 31 2
Lawsonia intracellularis N343 plasmid 2 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. / 1 0
Lawsonia intracellularis N343 plasmid 3 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. / 2 0
Lawsonia intracellularis PHE/MN1-00 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. / 28 5
Listonella anguillarum M3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 72 1
Listonella anguillarum M3 plasmid unnamed Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 4 0
Listonella anguillarum M3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 141 5
Photobacterium profundum SS9 plasmid pPBPR1 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Photobacterium. / 1 0
Photobacterium profundum SS9 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Photobacterium. / 146 10
Photobacterium profundum SS9 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Photobacterium. / 186 5
Vibrio anguillarum 775 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Listonella. / 75 0
Vibrio alginolyticus NBRC 15630 = ATCC 17749 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 156 1
Vibrio alginolyticus NBRC 15630 = ATCC 17749 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 159 0
Vibrio anguillarum 775 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Listonella. / 142 5
Vibrio cholerae IEC224 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 151 0
Vibrio cholerae IEC224 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 70 0
Vibrio cholerae LMA3984-4 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 122 5
Vibrio cholerae LMA3984-4 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 63 1
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 157 2
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 73 0
Vibrio campbellii ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 167 3
Vibrio campbellii ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 147 0
Vibrio campbellii ATCC BAA-1116 plasmid unnamed Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 3 0
Vibrio cholerae M66-2 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 71 0
Vibrio cholerae MJ-1236 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 147 6
Vibrio cholerae MJ-1236 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 72 2
Vibrio cholerae O1 str. 2010EL-1786 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 151 0
Vibrio cholerae O1 str. 2010EL-1786 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 70 0
Vibrio cholerae O1 biovar El Tor str. N16961 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 143 1
Vibrio cholerae O1 biovar El Tor str. N16961 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 69 1
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 157 1
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 73 0
Vibrio cholerae M66-2 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 139 0
Vibrio fischeri ES114 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 106 1
Vibrio fischeri ES114 plasmid pES100 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 1 0
Vibrio fischeri MJ11 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 136 0
Vibrio fischeri MJ11 plasmid pMJ100 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 3 0
Vibrio fischeri MJ11 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 108 0
Vibrio furnissii NCTC 11218 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 174 6
Vibrio furnissii NCTC 11218 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 156 3
Vibrio fischeri ES114 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 129 0
Vibrio harveyi ATCC BAA-1116 plasmid pVIBHAR Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 3 0
Vibrio harveyi ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 150 0
Vibrio harveyi ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 175 0
Vibrio nigripulchritudo Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 191 0
Vibrio nigripulchritudo Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 224 1
Vibrio parahaemolyticus RIMD 2210633 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 153 0
Vibrio parahaemolyticus BB22OP Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 147 2
Vibrio parahaemolyticus BB22OP Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 149 3
Vibrio parahaemolyticus RIMD 2210633 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 159 0
Vibrio sp. Ex25 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 149 1
Vibrio splendidus LGP32 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 160 0
Vibrio splendidus LGP32 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 138 0
Vibrio sp. EJY3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 182 0
Vibrio sp. EJY3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 177 2
Vibrio sp. Ex25 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 152 2
Vibrio vulnificus CMCP6 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 140 2
Vibrio vulnificus MO6-24/O Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 145 2
Vibrio vulnificus MO6-24/O Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 139 0
Vibrio vulnificus YJ016 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 155 1
Vibrio vulnificus YJ016 plasmid pYJ016 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 2 1
Vibrio vulnificus YJ016 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 145 0
Vibrio vulnificus CMCP6 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 152 1


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