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Species Name
NCBI Taxon Id
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08-1736 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
2007-60-3289-1 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
3114 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
9150 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
AKU_12601 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
ATCC 30255) Bacteria
------Proteobacteria
----------Betaproteobacteria
--------------Kinetoplastibacterium.
Archaea.
Archaea
------Crenarchaeota
----------Thermoprotei
--------------Acidilobales
------------------Acidilobaceae
----------------------Acidilobus.
------------------Caldisphaeraceae
----------------------Caldisphaera.
--------------Desulfurococcales
------------------Desulfurococcaceae
----------------------Aeropyrum.
----------------------Desulfurococcus.
----------------------Ignicoccus.
----------------------Ignisphaera.
----------------------Staphylothermus.
----------------------Thermogladius.
----------------------Thermosphaera.
------------------Pyrodictiaceae
----------------------Hyperthermus.
----------------------Pyrolobus.
--------------Fervidicoccales
------------------Fervidicoccaceae
----------------------Fervidicoccus.
--------------Sulfolobales
------------------Sulfolobaceae
----------------------Acidianus.
----------------------Metallosphaera.
----------------------Sulfolobus.
--------------Thermoproteales
------------------Thermofilaceae
----------------------Thermofilum.
------------------Thermoproteaceae
----------------------Caldivirga.
----------------------Pyrobaculum.
----------------------Thermoproteus.
----------------------Vulcanisaeta.
------Euryarchaeota
----------Aciduliprofundum.
----------Archaeoglobi
--------------Archaeoglobales
------------------Archaeoglobaceae
----------------------Archaeoglobus.
----------------------Ferroglobus.
----------Candidatus Methanomethylophilus.
----------Halobacteria
--------------Halobacteriales
------------------Halobacteriaceae
----------------------Halalkalicoccus.
----------------------Haloarcula.
----------------------Halobacterium.
----------------------Haloferax.
----------------------Halogeometricum.
----------------------Halomicrobium.
----------------------Halopiger.
----------------------Haloquadratum.
----------------------Halorhabdus.
----------------------Halorubrum.
----------------------Haloterrigena.
----------------------Halovivax.
----------------------Natrialba.
----------------------Natrinema.
----------------------Natronobacterium.
----------------------Natronococcus.
----------------------Natronomonas.
----------------------Salinarchaeum.
----------Methanobacteria
--------------Methanobacteriales
------------------Methanobacteriaceae
----------------------Methanobacterium.
----------------------Methanobrevibacter.
----------------------Methanosphaera.
----------------------Methanothermobacter.
------------------Methanothermaceae
----------------------Methanothermus.
----------Methanococci
--------------Methanococcales
------------------Methanocaldococcaceae
----------------------Methanocaldococcus.
----------------------Methanotorris.
------------------Methanococcaceae
----------------------Methanococcus.
----------------------Methanothermococcus.
----------Methanomicrobia
--------------Methanocellales
------------------Methanocellaceae
----------------------Methanocella.
--------------Methanomicrobiales
------------------Genera incertae sedis
----------------------Methanoregula.
----------------------Methanosphaerula.
------------------Methanocorpusculaceae
----------------------Methanocorpusculum.
------------------Methanomicrobiaceae
----------------------Methanoculleus.
----------------------Methanoplanus.
------------------Methanoregulaceae
----------------------Methanoregula.
------------------Methanospirillaceae
----------------------Methanospirillum.
--------------Methanosarcinales
------------------Methanosaetaceae
----------------------Methanosaeta.
------------------Methanosarcinaceae
----------------------Methanococcoides.
----------------------Methanohalobium.
----------------------Methanohalophilus.
----------------------Methanolobus.
----------------------Methanomethylovorans.
----------------------Methanosalsum.
----------------------Methanosarcina.
--------------unclassified Methanomicrobia
------------------Methanomassiliicoccus.
----------Methanopyri
--------------Methanopyrales
------------------Methanopyraceae
----------------------Methanopyrus.
----------Thermococci
--------------Thermococcales
------------------Thermococcaceae
----------------------Pyrococcus.
----------------------Thermococcus.
----------Thermoplasmata
--------------Thermoplasmatales.
--------------Thermoplasmatales
------------------Ferroplasmaceae
----------------------Ferroplasma.
------------------Picrophilaceae
----------------------Picrophilus.
------------------Thermoplasmataceae
----------------------Thermoplasma.
----------environmental samples.
------Korarchaeota
----------Candidatus Korarchaeum.
------Nanoarchaeota
----------Nanoarchaeum.
------Thaumarchaeota
----------Cenarchaeales
--------------Cenarchaeaceae
------------------Cenarchaeum.
----------Nitrosopumilales
--------------Nitrosopumilaceae
------------------Candidatus Nitrosoarchaeum.
------------------Nitrosopumilus.
----------Nitrososphaerales
--------------Nitrososphaeraceae
------------------Nitrososphaera.
----------marine archaeal group 1
--------------Nitrosopumilales
------------------Nitrosopumilaceae
----------------------Nitrosopumilus.
----------unclassified Thaumarchaeota
--------------Candidatus Caldiarchaeum.
Bacteria.
Bacteria
------Acidobacteria
----------Acidobacteriales
--------------Acidobacteriaceae
------------------Acidobacterium.
------------------Granulicella.
------------------Terriglobus.
----------Candidatus Chloracidobacterium.
----------Candidatus Koribacter.
----------Solibacteres
--------------Solibacterales
------------------Solibacteraceae
----------------------Candidatus Solibacter.
------Actinobacteria
----------Acidimicrobidae
--------------Acidimicrobiales
------------------Acidimicrobineae
----------------------Acidimicrobiaceae
--------------------------Acidimicrobium.
--------------------------Ilumatobacter.
----------Actinobacteridae
--------------Actinomycetales
------------------Actinomycineae
----------------------Actinomycetaceae
--------------------------Arcanobacterium.
--------------------------Mobiluncus/Falcivibrio group
------------------------------Mobiluncus.
------------------Catenulisporineae
----------------------Catenulisporaceae
--------------------------Catenulispora.
------------------Corynebacterineae
----------------------Corynebacteriaceae
--------------------------Corynebacterium.
----------------------Gordoniaceae
--------------------------Gordonia.
----------------------Mycobacteriaceae
--------------------------Amycolicicoccus.
--------------------------Mycobacterium.
--------------------------Mycobacterium
------------------------------Mycobacterium abscessus.
------------------------------Mycobacterium avium complex (MAC).
------------------------------Mycobacterium tuberculosis complex.
----------------------Nocardiaceae
--------------------------Nocardia.
--------------------------Rhodococcus.
----------------------Segniliparaceae
--------------------------Segniliparus.
----------------------Tsukamurellaceae
--------------------------Tsukamurella.
------------------Frankineae
----------------------Acidothermaceae
--------------------------Acidothermus.
----------------------Frankiaceae
--------------------------Frankia.
----------------------Geodermatophilaceae
--------------------------Blastococcus.
--------------------------Geodermatophilus.
--------------------------Modestobacter.
----------------------Nakamurellaceae
--------------------------Nakamurella.
------------------Glycomycineae
----------------------Glycomycetaceae
--------------------------Stackebrandtia.
------------------Kineosporiineae
----------------------Kineosporiaceae
--------------------------Kineococcus.
------------------Micrococcineae
----------------------Beutenbergiaceae
--------------------------Beutenbergia.
----------------------Cellulomonadaceae
--------------------------Cellulomonas.
----------------------Dermabacteraceae
--------------------------Brachybacterium.
----------------------Dermacoccaceae
--------------------------Kytococcus.
----------------------Intrasporangiaceae
--------------------------Intrasporangium.
----------------------Jonesiaceae
--------------------------Jonesia.
----------------------Microbacteriaceae
--------------------------Clavibacter.
--------------------------Leifsonia.
--------------------------Microbacterium.
----------------------Micrococcaceae
--------------------------Arthrobacter.
--------------------------Kocuria.
--------------------------Micrococcus.
--------------------------Renibacterium.
--------------------------Rothia.
----------------------Promicromonosporaceae
--------------------------Isoptericola.
--------------------------Xylanimonas.
----------------------Sanguibacteraceae
--------------------------Sanguibacter.
----------------------Tropheryma.
------------------Micromonosporineae
----------------------Micromonosporaceae
--------------------------Actinoplanes.
--------------------------Micromonospora.
--------------------------Salinispora.
--------------------------Verrucosispora.
------------------Propionibacterineae
----------------------Nocardioidaceae
--------------------------Kribbella.
--------------------------Nocardioides.
----------------------Propionibacteriaceae
--------------------------Microlunatus.
--------------------------Propionibacterium.
------------------Pseudonocardineae
----------------------Pseudonocardiaceae
--------------------------Actinosynnema.
--------------------------Amycolatopsis.
--------------------------Pseudonocardia.
--------------------------Saccharomonospora.
--------------------------Saccharopolyspora.
--------------------------Saccharothrix.
--------------------------Thermobispora.
------------------Streptomycineae
----------------------Streptomycetaceae
--------------------------Kitasatospora.
--------------------------Streptomyces.
------------------Streptosporangineae
----------------------Nocardiopsaceae
--------------------------Nocardiopsis.
--------------------------Thermobifida.
----------------------Streptosporangiaceae
--------------------------Streptosporangium.
----------------------Thermomonosporaceae
--------------------------Thermomonospora.
--------------Bifidobacteriales
------------------Bifidobacteriaceae
----------------------Bifidobacterium.
----------------------Gardnerella.
----------Coriobacteridae
--------------Coriobacteriales
------------------Coriobacterineae
----------------------Coriobacteriaceae
--------------------------Adlercreutzia.
--------------------------Atopobium.
--------------------------Coriobacterium.
--------------------------Cryptobacterium.
--------------------------Eggerthella.
--------------------------Gordonibacter.
--------------------------Olsenella.
--------------------------Slackia.
----------Rubrobacteridae
--------------Rubrobacterales
------------------Rubrobacterineae
----------------------Rubrobacteraceae
--------------------------Rubrobacter.
--------------Solirubrobacterales
------------------Conexibacteraceae
----------------------Conexibacter.
------Aquificae
----------Aquificales
--------------Aquificaceae
------------------Aquifex.
------------------Hydrogenobacter.
------------------Hydrogenobaculum.
------------------Thermocrinis.
--------------Desulfurobacteriaceae
------------------Desulfurobacterium.
------------------Thermovibrio.
--------------Hydrogenothermaceae
------------------Persephonella.
------------------Sulfurihydrogenibium.
------Armatimonadetes
----------Chthonomonadetes
--------------Chthonomonadales
------------------Chthonomonadaceae
----------------------Chthonomonas.
------Bacteroidetes
----------Bacteroidetes Order II. Incertae sedis
--------------Rhodothermaceae
------------------Rhodothermus.
------------------Salinibacter.
----------Bacteroidia
--------------Bacteroidales
------------------Bacteroidaceae
----------------------Bacteroides.
------------------Candidatus Azobacteroides.
------------------Porphyromonadaceae
----------------------Odoribacter.
----------------------Paludibacter.
----------------------Parabacteroides.
----------------------Porphyromonas.
----------------------Tannerella.
------------------Prevotellaceae
----------------------Prevotella.
------------------Rikenellaceae
----------------------Alistipes.
----------Candidatus Amoebophilus.
----------Candidatus Cardinium.
----------Cytophagia
--------------Cytophagales
------------------Cyclobacteriaceae
----------------------Belliella.
----------------------Cyclobacterium.
----------------------Echinicola.
------------------Cytophagaceae
----------------------Cytophaga.
----------------------Dyadobacter.
----------------------Emticicia.
----------------------Fibrella.
----------------------Flexibacter.
----------------------Leadbetterella.
----------------------Runella.
----------------------Spirosoma.
------------------Flammeovirgaceae
----------------------Marivirga.
----------Flavobacteriia
--------------Flavobacteriales
------------------Blattabacteriaceae
----------------------Blattabacterium.
------------------Candidatus Sulcia.
------------------Candidatus Uzinura.
------------------Cryomorphaceae
----------------------Fluviicola.
----------------------Owenweeksia.
------------------Flavobacteriaceae.
------------------Flavobacteriaceae
----------------------Aequorivita.
----------------------Capnocytophaga.
----------------------Cellulophaga.
----------------------Croceibacter.
----------------------Flavobacterium.
----------------------Gramella.
----------------------Krokinobacter.
----------------------Lacinutrix.
----------------------Maribacter.
----------------------Muricauda.
----------------------Nonlabens.
----------------------Ornithobacterium.
----------------------Polaribacter.
----------------------Psychroflexus.
----------------------Riemerella.
----------------------Robiginitalea.
----------------------Weeksella.
----------------------Zobellia.
----------------------Zunongwangia.
----------Sphingobacteriia
--------------Sphingobacteriales
------------------Chitinophagaceae
----------------------Chitinophaga.
----------------------Niastella.
------------------Saprospiraceae
----------------------Haliscomenobacter.
----------------------Saprospira.
------------------Sphingobacteriaceae
----------------------Pedobacter.
----------------------Solitalea.
----------------------Sphingobacterium.
------Caldiserica
----------Caldisericia
--------------Caldisericales
------------------Caldisericaceae
----------------------Caldisericum.
------Candidatus Saccharibacteria.
------Candidatus Saccharibacteria
----------Candidatus Saccharimonas.
------Chlamydiae
----------Chlamydiales
--------------Chlamydiaceae
------------------Chlamydia/Chlamydophila group
----------------------Chlamydia.
----------------------Chlamydophila.
--------------Parachlamydiaceae
------------------Candidatus Protochlamydia.
------------------Parachlamydia.
--------------Simkaniaceae
------------------Simkania.
--------------Waddliaceae
------------------Waddlia.
------Chlorobi
----------Chlorobia
--------------Chlorobiales
------------------Chlorobiaceae
----------------------Chlorobaculum.
----------------------Chlorobium/Pelodictyon group
--------------------------Chlorobium.
--------------------------Pelodictyon.
----------------------Chloroherpeton.
----------------------Prosthecochloris.
------Chloroflexi
----------Anaerolineae
--------------Anaerolineales
------------------Anaerolineaceae
----------------------Anaerolinea.
----------Caldilineae
--------------Caldilineales
------------------Caldilineaceae
----------------------Caldilinea.
----------Chloroflexales
--------------Chloroflexaceae
------------------Chloroflexus.
------------------Roseiflexus.
----------Dehalococcoidetes
--------------Dehalococcoides.
--------------Dehalogenimonas.
----------Dehalococcoidia
--------------Dehalococcoidales
------------------Dehalococcoidaceae
----------------------Dehalococcoides.
----------Herpetosiphonales
--------------Herpetosiphonaceae
------------------Herpetosiphon.
----------Sphaerobacteridae
--------------Sphaerobacterales
------------------Sphaerobacterineae
----------------------Sphaerobacteraceae
--------------------------Sphaerobacter.
----------Thermomicrobiales
--------------Thermomicrobiaceae
------------------Thermomicrobium.
------Chrysiogenetes
----------Chrysiogenales
--------------Chrysiogenaceae
------------------Desulfurispirillum.
------Cyanobacteria
----------Chroococcales.
----------Chroococcales
--------------Acaryochloris.
--------------Cyanothece.
--------------Microcystis.
--------------Synechococcus.
--------------Synechocystis.
--------------Thermosynechococcus.
----------Gloeobacteria
--------------Gloeobacterales
------------------Gloeobacter.
----------Nostocales
--------------Nostocaceae
------------------Anabaena.
------------------Cylindrospermum.
------------------Nostoc.
------------------Trichormus.
--------------Rivulariaceae
------------------Calothrix.
------------------Rivularia.
----------Oscillatoriales
--------------Trichodesmium.
----------Oscillatoriophycideae
--------------Chroococcales
------------------Chamaesiphon.
------------------Cyanobacterium.
------------------Cyanobium.
------------------Dactylococcopsis.
------------------Gloeocapsa.
------------------Halothece cluster
----------------------Halothece.
------------------Synechococcus.
------------------Synechocystis.
------------------Thermosynechococcus.
--------------Oscillatoriales
------------------Arthrospira.
------------------Crinalium.
------------------Geitlerinema.
------------------Leptolyngbya.
------------------Microcoleus.
------------------Oscillatoria.
------------------Pseudanabaena.
----------Pleurocapsales
--------------Chroococcidiopsis.
--------------Pleurocapsa.
--------------Stanieria.
----------Prochlorales
--------------Prochlorococcaceae
------------------Prochlorococcus.
------Deferribacteres
----------Deferribacterales
--------------Deferribacteraceae.
--------------Deferribacteraceae
------------------Deferribacter.
------------------Denitrovibrio.
------------------Flexistipes.
------Deinococcus-Thermus
----------Deinococci
--------------Deinococcales
------------------Deinococcaceae
----------------------Deinococcus.
------------------Trueperaceae
----------------------Truepera.
--------------Thermales
------------------Thermaceae
----------------------Marinithermus.
----------------------Meiothermus.
----------------------Oceanithermus.
----------------------Thermus.
------Dictyoglomi
----------Dictyoglomales
--------------Dictyoglomaceae
------------------Dictyoglomus.
------Elusimicrobia
----------Elusimicrobia (class)
--------------Elusimicrobiales
------------------Elusimicrobiaceae
----------------------Elusimicrobium.
----------environmental samples.
------Fibrobacteres
----------Fibrobacterales
--------------Fibrobacteraceae
------------------Fibrobacter.
------Firmicutes
----------Bacillales
--------------Alicyclobacillaceae
------------------Alicyclobacillus.
------------------Kyrpidia.
--------------Bacillaceae
------------------Anoxybacillus.
------------------Bacillus.
------------------Bacillus
----------------------Bacillus cereus group.
------------------Geobacillus.
------------------Halobacillus.
------------------Lysinibacillus.
------------------Oceanobacillus.
--------------Bacillales Family XII. Incertae Sedis
------------------Exiguobacterium.
--------------Listeriaceae
------------------Listeria.
--------------Macrococcus.
--------------Paenibacillaceae
------------------Brevibacillus.
------------------Paenibacillus.
--------------Staphylococcus.
----------Bacilli
--------------Bacillales
------------------Bacillaceae
----------------------Amphibacillus.
----------------------Bacillus.
----------------------Bacillus
--------------------------Bacillus cereus group.
----------------------Geobacillus.
------------------Bacillales Family XII. Incertae Sedis
----------------------Exiguobacterium.
------------------Listeriaceae
----------------------Listeria.
------------------Paenibacillaceae
----------------------Paenibacillus.
----------------------Thermobacillus.
------------------Planococcaceae
----------------------Solibacillus.
------------------Staphylococcus.
--------------Lactobacillales
------------------Carnobacteriaceae
----------------------Carnobacterium.
------------------Enterococcaceae
----------------------Enterococcus.
------------------Lactobacillaceae
----------------------Lactobacillus.
----------------------Pediococcus.
------------------Leuconostoc.
------------------Streptococcaceae
----------------------Lactococcus.
----------------------Streptococcus.
----------------------Streptococcus
--------------------------Streptococcus anginosus group.
----------Clostridia
--------------Clostridiales.
--------------Clostridiales
------------------Clostridiaceae
----------------------Alkaliphilus.
----------------------Candidatus Arthromitus.
----------------------Clostridium.
------------------Clostridiales Family XI. Incertae Sedis
----------------------Anaerococcus.
----------------------Finegoldia.
------------------Clostridiales Family XVII. Incertae Sedis
----------------------Sulfobacillus.
----------------------Thermaerobacter.
------------------Clostridiales Family XVIII. Incertae Sedis
----------------------Symbiobacterium.
------------------Eubacteriaceae
----------------------Acetobacterium.
----------------------Eubacterium.
------------------Heliobacteriaceae
----------------------Heliobacterium.
------------------Lachnospiraceae
----------------------Butyrivibrio.
----------------------Cellulosilyticum.
----------------------Coprococcus.
----------------------Roseburia.
------------------Oscillospiraceae
----------------------Oscillibacter.
------------------Peptococcaceae
----------------------Candidatus Desulforudis.
----------------------Dehalobacter.
----------------------Desulfitobacterium.
----------------------Desulfosporosinus.
----------------------Desulfotomaculum.
----------------------Pelotomaculum.
----------------------Syntrophobotulus.
----------------------Thermincola.
------------------Peptostreptococcaceae.
------------------Peptostreptococcaceae
----------------------Filifactor.
------------------Ruminococcaceae
----------------------Ethanoligenens.
----------------------Faecalibacterium.
----------------------Ruminococcus.
----------------------unclassified Ruminococcaceae.
------------------Syntrophomonadaceae
----------------------Syntrophomonas.
----------------------Syntrophothermus.
--------------Halanaerobiales
------------------Halanaerobiaceae
----------------------Halanaerobium.
----------------------Halothermothrix.
------------------Halobacteroidaceae
----------------------Acetohalobium.
----------------------Halobacteroides.
--------------Natranaerobiales
------------------Natranaerobiaceae
----------------------Natranaerobius.
--------------Thermoanaerobacterales
------------------Thermoanaerobacteraceae
----------------------Caldanaerobacter.
----------------------Carboxydothermus.
----------------------Moorella group
--------------------------Ammonifex.
--------------------------Moorella.
----------------------Tepidanaerobacter.
----------------------Thermacetogenium.
----------------------Thermoanaerobacter.
------------------Thermoanaerobacterales Family III. Incertae Sedis
----------------------Caldicellulosiruptor.
----------------------Thermoanaerobacterium.
----------------------Thermosediminibacter.
------------------Thermoanaerobacterales Family IV. Incertae Sedis
----------------------Mahella.
------------------Thermodesulfobiaceae
----------------------Coprothermobacter.
----------------------Thermodesulfobium.
----------Erysipelotrichi
--------------Erysipelotrichales
------------------Erysipelotrichaceae
----------------------Erysipelothrix.
----------Erysipelotrichia
--------------Erysipelotrichales
------------------Erysipelotrichaceae.
------------------Erysipelotrichaceae
----------------------Erysipelothrix.
----------Lactobacillales
--------------Aerococcaceae
------------------Aerococcus.
--------------Carnobacteriaceae
------------------Carnobacterium.
--------------Enterococcaceae
------------------Enterococcus.
------------------Melissococcus.
------------------Tetragenococcus.
--------------Lactobacillaceae
------------------Lactobacillus.
------------------Pediococcus.
--------------Leuconostoc.
--------------Oenococcus.
--------------Streptococcaceae
------------------Lactococcus.
------------------Streptococcus.
------------------Streptococcus
----------------------Streptococcus anginosus group.
--------------Weissella.
----------Negativicutes
--------------Selenomonadales
------------------Acidaminococcaceae
----------------------Acidaminococcus.
------------------Veillonellaceae
----------------------Megamonas.
----------------------Megasphaera.
----------------------Selenomonas.
----------------------Veillonella.
------Fusobacteria
----------Fusobacteriales
--------------Fusobacteriaceae
------------------Fusobacterium.
------------------Ilyobacter.
--------------Leptotrichiaceae
------------------Leptotrichia.
------------------Sebaldella.
------------------Streptobacillus.
------Gemmatimonadetes
----------Gemmatimonadales
--------------Gemmatimonadaceae
------------------Gemmatimonas.
------Ignavibacteriae
----------Ignavibacteria
--------------Ignavibacteriales
------------------Ignavibacteriaceae
----------------------Ignavibacterium.
------------------Melioribacteraceae
----------------------Melioribacter.
------Nitrospirae
----------Nitrospirales
--------------Nitrospiraceae
------------------Leptospirillum.
------------------Nitrospira.
------------------Thermodesulfovibrio.
------Planctomycetes
----------Phycisphaerae
--------------Phycisphaerales
------------------Phycisphaeraceae
----------------------Phycisphaera.
----------Planctomycetia
--------------Planctomycetales
------------------Planctomycetaceae
----------------------Isosphaera.
----------------------Pirellula.
----------------------Planctomyces.
----------------------Rhodopirellula.
----------------------Singulisphaera.
------Proteobacteria
----------Alphaproteobacteria
--------------Caulobacterales
------------------Caulobacteraceae
----------------------Asticcacaulis.
----------------------Brevundimonas.
----------------------Caulobacter.
----------------------Phenylobacterium.
--------------Micavibrio.
--------------Parvularculales
------------------Parvularculaceae
----------------------Parvularcula.
--------------Polymorphum.
--------------Rhizobiales
------------------Bartonellaceae
----------------------Bartonella.
------------------Beijerinckiaceae
----------------------Beijerinckia.
----------------------Methylocella.
------------------Bradyrhizobiaceae
----------------------Bradyrhizobium.
----------------------Nitrobacter.
----------------------Oligotropha.
----------------------Rhodopseudomonas.
------------------Brucellaceae
----------------------Brucella.
----------------------Ochrobactrum.
------------------Candidatus Hodgkinia.
------------------Hyphomicrobiaceae
----------------------Hyphomicrobium.
----------------------Pelagibacterium.
----------------------Rhodomicrobium.
------------------Methylobacteriaceae
----------------------Methylobacterium.
------------------Methylocystaceae
----------------------Methylocystis.
------------------Phyllobacteriaceae
----------------------Chelativorans.
----------------------Mesorhizobium.
----------------------Parvibaculum.
------------------Rhizobiaceae
----------------------Candidatus Liberibacter.
----------------------Rhizobium/Agrobacterium group
--------------------------Agrobacterium.
--------------------------Rhizobium.
----------------------Sinorhizobium/Ensifer group
--------------------------Sinorhizobium.
------------------Xanthobacteraceae
----------------------Azorhizobium.
----------------------Starkeya.
----------------------Xanthobacter.
--------------Rhodobacterales
------------------Hyphomonadaceae
----------------------Hirschia.
----------------------Hyphomonas.
----------------------Maricaulis.
------------------Rhodobacteraceae
----------------------Dinoroseobacter.
----------------------Jannaschia.
----------------------Ketogulonicigenium.
----------------------Leisingera.
----------------------Octadecabacter.
----------------------Paracoccus.
----------------------Phaeobacter.
----------------------Pseudovibrio.
----------------------Rhodobacter.
----------------------Roseobacter.
----------------------Ruegeria.
--------------Rhodospirillales
------------------Acetobacteraceae
----------------------Acetobacter.
----------------------Acidiphilium.
----------------------Gluconacetobacter.
----------------------Gluconobacter.
----------------------Granulibacter.
------------------Rhodospirillaceae
----------------------Azospirillum.
----------------------Candidatus Endolissoclinum.
----------------------Magnetospirillum.
----------------------Rhodospirillum.
----------------------Tistrella.
--------------Rickettsiales
------------------Anaplasmataceae
----------------------Anaplasma.
----------------------Anaplasma
--------------------------phagocytophilum group.
----------------------Ehrlichia.
----------------------Neorickettsia.
----------------------Wolbachieae
--------------------------Wolbachia.
------------------Candidatus Midichloria.
------------------Rickettsiaceae
----------------------Rickettsieae
--------------------------Orientia.
--------------------------Rickettsia
------------------------------belli group.
------------------------------spotted fever group.
------------------------------typhus group.
------------------SAR11 cluster
----------------------Candidatus Pelagibacter.
--------------SAR11 cluster.
--------------SAR11 cluster
------------------Candidatus Pelagibacter.
--------------SAR116 cluster
------------------Candidatus Puniceispirillum.
--------------Sphingomonadales
------------------Erythrobacteraceae
----------------------Erythrobacter.
------------------Sphingomonadaceae
----------------------Novosphingobium.
----------------------Sphingobium.
----------------------Sphingomonas.
----------------------Sphingopyxis.
----------------------Zymomonas.
----------Betaproteobacteria.
----------Betaproteobacteria
--------------Burkholderiales
------------------Alcaligenaceae.
------------------Alcaligenaceae
----------------------Achromobacter.
----------------------Bordetella.
----------------------Pusillimonas.
----------------------Taylorella.
------------------Burkholderiaceae
----------------------Burkholderia.
----------------------Burkholderia
--------------------------Burkholderia cepacia complex.
--------------------------pseudomallei group.
----------------------Cupriavidus.
----------------------Pandoraea.
----------------------Polynucleobacter.
----------------------Ralstonia.
------------------Comamonadaceae.
------------------Comamonadaceae
----------------------Acidovorax.
----------------------Albidiferax.
----------------------Alicycliphilus.
----------------------Comamonas.
----------------------Delftia.
----------------------Polaromonas.
----------------------Ramlibacter.
----------------------Variovorax.
----------------------Verminephrobacter.
------------------Leptothrix.
------------------Methylibium.
------------------Oxalobacteraceae
----------------------Candidatus Zinderia.
----------------------Collimonas.
----------------------Herbaspirillum.
----------------------Herminiimonas.
----------------------Janthinobacterium.
------------------Rubrivivax.
------------------Thiomonas.
--------------Candidatus Accumulibacter.
--------------Candidatus Nasuia.
--------------Candidatus Profftella.
--------------Candidatus Tremblaya.
--------------Gallionellales
------------------Gallionellaceae
----------------------Gallionella.
----------------------Sideroxydans.
--------------Hydrogenophilales
------------------Hydrogenophilaceae
----------------------Sulfuricella.
----------------------Thiobacillus.
--------------Kinetoplastibacterium.
--------------Methylophilales
------------------Methylophilaceae
----------------------Methylobacillus.
----------------------Methylotenera.
----------------------Methylovorus.
--------------Neisseriales
------------------Neisseriaceae
----------------------Chromobacterium.
----------------------Laribacter.
----------------------Neisseria.
----------------------Pseudogulbenkiania.
--------------Nitrosomonadales
------------------Nitrosomonadaceae
----------------------Nitrosomonas.
----------------------Nitrosospira.
--------------Rhodocyclales
------------------Rhodocyclaceae
----------------------Aromatoleum.
----------------------Azoarcus.
----------------------Azospira.
----------------------Dechloromonas.
----------------------Thauera.
----------Deltaproteobacteria.
----------Deltaproteobacteria
--------------Bdellovibrionales
------------------Bacteriovoracaceae
----------------------Bacteriovorax.
------------------Bdellovibrionaceae
----------------------Bdellovibrio.
--------------Desulfarculales
------------------Desulfarculaceae
----------------------Desulfarculus.
--------------Desulfobacterales
------------------Desulfobacteraceae
----------------------Desulfatibacillum.
----------------------Desulfobacterium.
----------------------Desulfobacula.
----------------------Desulfococcus.
------------------Desulfobulbaceae
----------------------Desulfobulbus.
----------------------Desulfocapsa.
----------------------Desulfotalea.
----------------------Desulfurivibrio.
--------------Desulfovibrionales
------------------Desulfohalobiaceae
----------------------Desulfohalobium.
------------------Desulfomicrobiaceae
----------------------Desulfomicrobium.
------------------Desulfovibrionaceae
----------------------Desulfovibrio.
----------------------Lawsonia.
--------------Desulfurellales
------------------Desulfurellaceae
----------------------Hippea.
--------------Desulfuromonadales
------------------Geobacteraceae
----------------------Geobacter.
------------------Pelobacteraceae
----------------------Pelobacter.
--------------Myxococcales
------------------Cystobacterineae
----------------------Cystobacteraceae
--------------------------Stigmatella.
----------------------Myxococcaceae
--------------------------Anaeromyxobacter.
--------------------------Corallococcus.
--------------------------Myxococcus.
------------------Nannocystineae
----------------------Kofleriaceae
--------------------------Haliangium.
------------------Sorangiineae
----------------------Polyangiaceae
--------------------------Sorangium.
--------------Syntrophobacterales
------------------Syntrophaceae
----------------------Desulfobacca.
----------------------Desulfomonile.
----------------------Syntrophus.
------------------Syntrophobacteraceae
----------------------Syntrophobacter.
----------Epsilonproteobacteria
--------------Campylobacterales
------------------Campylobacteraceae
----------------------Arcobacter.
----------------------Campylobacter.
----------------------Sulfurospirillum.
------------------Helicobacteraceae
----------------------Helicobacter.
----------------------Sulfuricurvum.
----------------------Sulfuricurvum
--------------------------environmental samples.
----------------------Sulfurimonas.
----------------------Wolinella.
--------------Nautiliales
------------------Nautiliaceae
----------------------Nautilia.
--------------Nitratifractor.
--------------Nitratiruptor.
--------------Sulfurovum.
----------Gammaproteobacteria.
----------Gammaproteobacteria
--------------Acidithiobacillales
------------------Acidithiobacillaceae
----------------------Acidithiobacillus.
--------------Aeromonadales
------------------Aeromonadaceae
----------------------Aeromonas.
----------------------Oceanimonas.
----------------------Tolumonas.
--------------Alteromonadales
------------------Alteromonadaceae
----------------------Alteromonas.
----------------------Glaciecola.
----------------------Marinobacter.
----------------------Saccharophagus.
------------------Alteromonadales genera incertae sedis
----------------------Teredinibacter.
------------------Colwelliaceae
----------------------Colwellia.
------------------Ferrimonadaceae
----------------------Ferrimonas.
------------------Idiomarinaceae
----------------------Idiomarina.
------------------Pseudoalteromonadaceae
----------------------Pseudoalteromonas.
------------------Psychromonadaceae
----------------------Psychromonas.
------------------Shewanellaceae
----------------------Shewanella.
--------------Candidatus Baumannia.
--------------Candidatus Carsonella.
--------------Cardiobacteriales
------------------Cardiobacteriaceae
----------------------Dichelobacter.
--------------Chromatiales
------------------Chromatiaceae
----------------------Allochromatium.
----------------------Nitrosococcus.
----------------------Thiocystis.
----------------------Thioflavicoccus.
------------------Ectothiorhodospiraceae
----------------------Alkalilimnicola.
----------------------Halorhodospira.
----------------------Spiribacter.
----------------------Thioalkalivibrio.
------------------Halothiobacillaceae
----------------------Halothiobacillus.
--------------Enterobacteriales
------------------Enterobacteriaceae.
------------------Enterobacteriaceae
----------------------Buchnera.
----------------------Candidatus Moranella.
----------------------Candidatus Riesia.
----------------------Citrobacter.
----------------------Cronobacter.
----------------------Dickeya.
----------------------Edwardsiella.
----------------------Enterobacter.
----------------------Enterobacter
--------------------------Enterobacter cloacae complex.
----------------------Erwinia.
----------------------Escherichia.
----------------------Klebsiella.
----------------------Morganella.
----------------------Pantoea.
----------------------Pectobacterium.
----------------------Photorhabdus.
----------------------Proteus.
----------------------Providencia.
----------------------Rahnella.
----------------------Raoultella.
----------------------Salmonella.
----------------------Salmonella
--------------------------Salmonella enterica subsp. enterica serovar Agona.
--------------------------Salmonella enterica subsp. enterica serovar Dublin.
--------------------------Salmonella enterica subsp. enterica serovar Gallinarum.
--------------------------Salmonella enterica subsp. enterica serovar Heidelberg.
--------------------------Salmonella enterica subsp. enterica serovar Newport.
--------------------------Salmonella enterica subsp. enterica serovar Paratyphi B.
--------------------------Salmonella enterica subsp. enterica serovar Typhi.
--------------------------Salmonella enterica subsp. enterica serovar Typhimurium.
----------------------Serratia.
----------------------Serratia
--------------------------Serratia symbiotica.
----------------------Shigella.
----------------------Sodalis.
----------------------Wigglesworthia.
----------------------Xenorhabdus.
----------------------Yersinia.
----------------------ant endosymbionts
--------------------------Candidatus Blochmannia.
----------------------aphid secondary symbionts.
----------------------aphid secondary symbionts
--------------------------Candidatus Hamiltonella.
--------------Legionellales
------------------Coxiellaceae
----------------------Coxiella.
------------------Legionellaceae
----------------------Legionella.
--------------Methylococcales
------------------Methylococcaceae
----------------------Methylococcus.
----------------------Methylomicrobium.
----------------------Methylomonas.
--------------Oceanospirillales
------------------Alcanivoracaceae
----------------------Alcanivorax.
----------------------Kangiella.
------------------Hahellaceae
----------------------Hahella.
------------------Halomonadaceae
----------------------Chromohalobacter.
----------------------Halomonas.
----------------------Zymobacter group
--------------------------whitefly endosymbionts
------------------------------Candidatus Portiera.
------------------Marinomonas.
------------------Thalassolituus.
--------------Pasteurellales
------------------Pasteurellaceae
----------------------Actinobacillus.
----------------------Aggregatibacter.
----------------------Basfia.
----------------------Bibersteinia.
----------------------Gallibacterium.
----------------------Haemophilus.
----------------------Histophilus.
----------------------Mannheimia.
----------------------Pasteurella.
--------------Pseudomonadales
------------------Moraxellaceae
----------------------Acinetobacter.
----------------------Acinetobacter
--------------------------Acinetobacter calcoaceticus/baumannii complex.
----------------------Moraxella.
----------------------Psychrobacter.
------------------Pseudomonadaceae
----------------------Azotobacter.
----------------------Cellvibrio.
----------------------Pseudomonas.
----------------------Pseudomonas
--------------------------Pseudomonas savastanoi.
--------------------------Pseudomonas syringae.
--------------Simiduia.
--------------Thiotrichales
------------------Francisellaceae
----------------------Francisella.
------------------Piscirickettsiaceae
----------------------Cycloclasticus.
----------------------Methylophaga.
----------------------Thioalkalimicrobium.
----------------------Thiomicrospira.
--------------Vibrionales
------------------Vibrionaceae
----------------------Aliivibrio.
----------------------Listonella.
----------------------Photobacterium.
----------------------Vibrio.
--------------Xanthomonadales
------------------Xanthomonadaceae
----------------------Frateuria.
----------------------Pseudoxanthomonas.
----------------------Rhodanobacter.
----------------------Stenotrophomonas
--------------------------Stenotrophomonas maltophilia group.
----------------------Xanthomonas.
----------------------Xylella.
--------------sulfur-oxidizing symbionts.
----------Magnetococcus.
------Spirochaetes
----------Spirochaetales
--------------Brachyspiraceae
------------------Brachyspira.
--------------Leptospiraceae
------------------Leptospira.
------------------Turneriella.
--------------Sphaerochaeta.
--------------Spirochaetaceae
------------------Borrelia.
------------------Borrelia
----------------------Borrelia burgdorferi group.
------------------Spirochaeta.
------------------Treponema.
------Synergistetes.
------Synergistetes
----------Synergistia
--------------Synergistales
------------------Synergistaceae
----------------------Aminobacterium.
----------------------Anaerobaculum.
----------------------Thermanaerovibrio.
----------------------Thermovirga.
------Tenericutes
----------Mollicutes
--------------Acholeplasmatales
------------------Acholeplasmataceae
----------------------Acholeplasma.
----------------------Candidatus Phytoplasma
--------------------------16SrX (Apple proliferation group).
--------------------------16SrXII (Stolbur group).
--------------------------Candidatus Phytoplasma asteris.
--------------Entomoplasmatales
------------------Entomoplasmataceae
----------------------Mesoplasma.
------------------Spiroplasmataceae
----------------------Spiroplasma.
--------------Mycoplasmataceae
------------------Mycoplasma.
------------------Ureaplasma.
------Thermobaculum.
------Thermodesulfobacteria
----------Thermodesulfobacteriales
--------------Thermodesulfobacteriaceae
------------------Thermodesulfatator.
------------------Thermodesulfobacterium.
------Thermotogae
----------Thermotogales
--------------Thermotogaceae
------------------Fervidobacterium.
------------------Kosmotoga.
------------------Marinitoga.
------------------Mesotoga.
------------------Petrotoga.
------------------Thermosipho.
------------------Thermotoga.
------Verrucomicrobia
----------Opitutae
--------------Opitutales
------------------Opitutaceae
----------------------Opitutus.
--------------Puniceicoccales
------------------Puniceicoccaceae
----------------------Coraliomargarita.
----------Verrucomicrobiae
--------------Verrucomicrobiales
------------------Verrucomicrobiaceae
----------------------Akkermansia.
----------unclassified Verrucomicrobia
--------------Methylacidiphilales
------------------Methylacidiphilaceae
----------------------Methylacidiphilum.
------candidate division NC10
----------Candidatus Methylomirabilis.
------candidate division SR1.
------candidate division WWE1
----------Candidatus Cloacamonas.
------candidate division WWE3.
CFSAN000189 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
CFSAN001992 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
CFSAN002069 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
CVM19633 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
P125109 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella
--------------------------Salmonella enterica subsp. enterica serovar Enteritidis.
RKS4594 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella
--------------------------Salmonella enterica subsp. enterica serovar Paratyphi C.
RSK2980 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella
--------------------------------.
SC-B67 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella
--------------------------Salmonella enterica subsp. enterica serovar Choleraesuis.
T000240 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella
--------------------------Salmonella enterica subsp. enterica serovar Typhimurium.
USMARC-S3124.1 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
Viruses
------dsDNA viruses, no RNA stage
----------unclassified dsDNA phages.
------unclassified phages.
culicis) Bacteria
------Proteobacteria
----------Betaproteobacteria
--------------Kinetoplastibacterium.
morsitans (Yale colony) Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Wigglesworthia.
str. CDC1983-67 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
str. CFSAN001921 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella.
str. RKS5078 Bacteria
------Proteobacteria
----------Gammaproteobacteria
--------------Enterobacteriales
------------------Enterobacteriaceae
----------------------Salmonella
--------------------------Salmonella enterica subsp. enterica serovar Gallinarum/pullorum.
Organism
Lineage
Transcription Factor
misPredicted TF protein
Paenibacillus polymyxa M1
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
299
159
Lactobacillus fermentum CECT 5716
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
39
74
butyrate-producing bacterium SM4/1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales.
/
99
56
Roseburia intestinalis XB6B4
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Roseburia.
/
223
55
Ruminococcus sp. SR1/5
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
Ruminococcus.
/
179
53
Clostridium cf. saccharolyticum K10
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
207
50
Enterococcus sp. 7L76
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
174
45
Roseburia intestinalis M50/1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Roseburia.
/
234
45
Faecalibacterium prausnitzii L2-6
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
Faecalibacterium.
/
182
43
butyrate-producing bacterium SSC/2
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales.
/
196
40
Coprococcus sp. ART55/1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Coprococcus.
/
143
40
Coprococcus catus GD/7
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Coprococcus.
/
207
34
Eubacterium rectale M104/1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
184
33
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Staphylococcus aureus subsp. aureus ST228
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
85
32
Lactobacillus salivarius CECT 5713
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
60
31
Paenibacillus mucilaginosus 3016
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
636
30
Faecalibacterium prausnitzii SL3/3
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
Faecalibacterium.
/
183
30
Ruminococcus bromii L2-63
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
Ruminococcus.
/
101
30
Streptococcus parauberis KCTC 11537
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
126
28
butyrate-producing bacterium SS3/4
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales.
/
175
28
Eubacterium rectale DSM 17629
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
187
28
Megamonas hypermegale ART12/1
Bacteria
/
Firmicutes
/
Negativicutes
/
Selenomonadales
/
Veillonellaceae
/
Megamonas.
/
98
27
Eubacterium siraeum 70/3
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
139
25
Eubacterium cylindroides T2-87
Bacteria
/
Firmicutes
/
Erysipelotrichia
/
Erysipelotrichales
/
Erysipelotrichaceae.
/
87
24
Clostridium tetani E88
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
145
23
Butyrivibrio fibrisolvens 16/4
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Butyrivibrio.
/
144
23
Lactobacillus helveticus CNRZ32
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
77
22
Paenibacillus mucilaginosus K02
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
652
21
Eubacterium siraeum V10Sc8a
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
118
21
Ruminococcus champanellensis 18P13
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
Ruminococcus.
/
115
21
Bacillus thuringiensis BMB171
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
302
20
Bacillus thuringiensis str. Al Hakam
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
331
20
Lactobacillus helveticus R0052
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
82
20
Clostridium difficile R20291
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
334
19
Bacillus subtilis XF-1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
251
19
Clostridium difficile CD196
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
323
18
Streptococcus dysgalactiae subsp. equisimilis RE378
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
121
17
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
192
16
Desulfitobacterium hafniense Y51
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfitobacterium.
/
438
15
Lactobacillus fermentum IFO 3956
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
105
14
Lactobacillus helveticus DPC 4571
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
70
14
Macrococcus caseolyticus JCSC5402
Bacteria
/
Firmicutes
/
Bacillales
/
Macrococcus.
/
98
14
Paenibacillus terrae HPL-003
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
508
14
Lactobacillus delbrueckii subsp. bulgaricus 2038
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
78
14
Listeria monocytogenes N53-1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
189
14
Clostridium kluyveri NBRC 12016
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
276
13
Clostridium kluyveri DSM 555
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
287
12
Paenibacillus mucilaginosus KNP414
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
639
12
Pelotomaculum thermopropionicum SI
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Pelotomaculum.
/
145
12
Clostridium botulinum F str. 230613
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
270
12
Lactobacillus casei LOCK919
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
204
12
Streptococcus lutetiensis 033
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
124
12
Streptococcus pyogenes M1 476
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
92
12
Acetobacterium woodii DSM 1030
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Acetobacterium.
/
279
11
Bacillus amyloliquefaciens Y2
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
254
11
Lactobacillus helveticus H10
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
94
11
Dehalobacter sp. CF
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Dehalobacter.
/
180
11
Enterococcus hirae ATCC 9790
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
173
11
Paenibacillus larvae subsp. larvae DSM 25430
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
228
11
Desulfotomaculum reducens MI-1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfotomaculum.
/
155
10
Lactobacillus reuteri JCM 1112
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
88
10
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Bacteria
/
Firmicutes
/
Bacillales
/
Alicyclobacillaceae
/
Alicyclobacillus.
/
169
10
Bacillus subtilis subsp. natto BEST195
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
266
10
Dehalobacter sp. DCA
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Dehalobacter.
/
182
10
Tepidanaerobacter acetatoxydans Re1
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Tepidanaerobacter.
/
155
10
Bacillus licheniformis ATCC 14580 (DSM 13)
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
304
9
Bacillus subtilis subsp. spizizenii TU-B-10
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
278
9
Staphylococcus aureus subsp. aureus USA300_TCH1516
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
120
9
Bacillus subtilis subsp. subtilis str. BSP1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
265
9
Clostridium acidurici 9a
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
206
9
Enterococcus faecium NRRL B-2354
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
172
9
Thermobacillus composti KWC4
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Paenibacillaceae
/
Thermobacillus.
/
295
9
Bacillus coagulans 2-6
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
126
8
Clostridium difficile 630
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
356
8
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
75
8
Streptococcus thermophilus LMD-9
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
76
8
Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
263
8
Lactobacillus salivarius CECT 5713 plasmid pHN3
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
11
8
Streptococcus infantarius subsp. infantarius CJ18
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
126
8
Bacillus amyloliquefaciens subsp. plantarum UCMB5033
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
249
8
Desulfotomaculum gibsoniae DSM 7213
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfotomaculum.
/
273
8
Lactobacillus casei W56
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
206
8
Streptococcus pneumoniae SPNA45
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
106
8
Bacillus amyloliquefaciens subsp. plantarum NAU-B3
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
255
8
Bacillus anthracis str. Ames Ancestor
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
344
7
Bacillus licheniformis ATCC 14580 (DSM 13)
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
307
7
Lactobacillus acidophilus 30SC
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
100
7
Staphylococcus aureus subsp. aureus str. Newman
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
131
7
Clostridium difficile BI1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptostreptococcaceae.
/
341
7
Streptococcus intermedius JTH08
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
112
7
Sulfobacillus acidophilus DSM 10332
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiales Family XVII. Incertae Sedis
/
Sulfobacillus.
/
167
7
Clostridium saccharoperbutylacetonicum N1-4(HMT)
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
504
7
Staphylococcus aureus Bmb9393
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
133
7
Streptococcus anginosus C1051
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
113
7
Streptococcus anginosus C238
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
158
7
Paenibacillus polymyxa CR1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
497
7
Bacillus amyloliquefaciens DSM 7
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
248
6
Bacillus megaterium DSM 319
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
346
6
Clostridium saccharolyticum WM1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
345
6
Lactobacillus amylovorus GRL 1112
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
89
6
Lactobacillus delbrueckii subsp. bulgaricus ND02
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
110
6
Lactobacillus kefiranofaciens ZW3
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
99
6
Megasphaera elsdenii DSM 20460
Bacteria
/
Firmicutes
/
Negativicutes
/
Selenomonadales
/
Veillonellaceae
/
Megasphaera.
/
121
6
Bacillus amyloliquefaciens LL3
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
246
6
Bacillus anthracis str. H9401 (Bacillus anthracis NCCP 12889)
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
346
6
Lactobacillus casei BD-II
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
206
6
Clostridium stercorarium subsp. stercorarium DSM 8532
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
unclassified Ruminococcaceae.
/
145
6
Lactobacillus buchneri CD034
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
131
6
Lactobacillus fermentum F-6
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
96
6
Lactobacillus rhamnosus LOCK900
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
189
6
Lactococcus lactis subsp. cremoris UC509.9
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
136
6
Lactococcus lactis subsp. lactis IO-1
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
142
6
Listeria monocytogenes J1816
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
206
6
Clostridium saccharobutylicum DSM 13864
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
312
6
Anoxybacillus flavithermus WK1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Anoxybacillus.
/
150
5
Bacillus anthracis str. Ames
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
346
5
Bacillus clausii KSM-K16
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
337
5
Brevibacillus brevis NBRC 100599
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Brevibacillus.
/
496
5
Clostridium botulinum A str. ATCC 3502
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
261
5
Clostridium botulinum A3 str. Loch Maree
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
281
5
Clostridium botulinum B1 str. Okra
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
281
5
Desulfitobacterium hafniense DCB-2
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfitobacterium.
/
406
5
Enterococcus faecalis V583
Bacteria
/
Firmicutes
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
236
5
Geobacillus thermoglucosidasius C56-YS93
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
199
5
Lactobacillus reuteri SD2112
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
160
5
Lactococcus lactis subsp. cremoris MG1363
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
168
5
Leuconostoc gasicomitatum LMG 18811
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
129
5
Paenibacillus sp. Y412MC10
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
662
5
Streptococcus macedonicus ACA-DC 198
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
130
5
Streptococcus pneumoniae ATCC 700669
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
110
5
Streptococcus pneumoniae CGSP14
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
116
5
Streptococcus suis 05ZYH33
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
102
5
Sulfobacillus acidophilus TPY
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiales Family XVII. Incertae Sedis
/
Sulfobacillus.
/
166
5
Thermoanaerobacter wiegelii Rt8.B1
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Thermoanaerobacter.
/
153
5
Clostridium botulinum H04402 065
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
270
5
Lactobacillus rhamnosus GG
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
189
5
Lactococcus lactis subsp. lactis CV56
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
149
5
Staphylococcus aureus subsp. aureus 11819-97
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
218
5
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
136
5
Bacillus amyloliquefaciens subsp. plantarum CAU B946
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
251
5
Clostridium pasteurianum BC1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
323
5
Enterococcus faecium Aus0085
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
206
5
Erysipelothrix rhusiopathiae SY1027
Bacteria
/
Firmicutes
/
Erysipelotrichia
/
Erysipelotrichales
/
Erysipelotrichaceae
/
Erysipelothrix.
/
108
5
Solibacillus silvestris StLB046
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Planococcaceae
/
Solibacillus.
/
231
5
Staphylococcus aureus subsp. aureus ST228 plasmid pI1T1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
3
5
Staphylococcus aureus subsp. aureus ST228 plasmid pI2T2
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
3
5
Staphylococcus aureus subsp. aureus ST228 plasmid pI3T3
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
3
5
Staphylococcus aureus subsp. aureus ST228 plasmid pI4T8
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
3
5
Staphylococcus aureus subsp. aureus ST228 plasmid pI6T6
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
3
5
Streptococcus intermedius B196
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
116
5
Streptococcus intermedius C270
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
111
5
Thermacetogenium phaeum DSM 12270
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Thermacetogenium.
/
121
5
Bacillus amyloliquefaciens CC178
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
243
5
Bacillus subtilis PY79
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
269
5
Clostridium autoethanogenum DSM 10061
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
329
5
Lactobacillus johnsonii N6.2
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
92
5
Acidaminococcus intestini RyC-MR95
Bacteria
/
Firmicutes
/
Negativicutes
/
Selenomonadales
/
Acidaminococcaceae
/
Acidaminococcus.
/
133
4
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI01
Bacteria
/
Firmicutes
/
Bacillales
/
Alicyclobacillaceae
/
Alicyclobacillus.
/
6
4
Bacillus anthracis str. A0248
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
340
4
Bacillus anthracis str. CDC 684
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
350
4
Bacillus anthracis str. Sterne
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
358
4
Bacillus atrophaeus 1942
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
267
4
Bacillus cereus AH820
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
339
4
Bacillus cereus ATCC 10987
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
346
4
Bacillus cereus biovar anthracis str. CI
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
336
4
Bacillus cereus E33L
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
357
4
Bacillus halodurans C-125
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
277
4
Caldicellulosiruptor hydrothermalis 108
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
154
4
Clostridium botulinum Ba4 str. 657
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
261
4
Clostridium cellulolyticum H10
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
185
4
Clostridium sp. SY8519
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
193
4
Coprothermobacter proteolyticus DSM 5265
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermodesulfobiaceae
/
Coprothermobacter.
/
37
4
Desulfosporosinus orientis DSM 765
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfosporosinus.
/
432
4
Desulfotomaculum acetoxidans DSM 771
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfotomaculum.
/
247
4
Geobacillus thermodenitrificans NG80-2
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
191
4
Kyrpidia tusciae DSM 2912
Bacteria
/
Firmicutes
/
Bacillales
/
Alicyclobacillaceae
/
Kyrpidia.
/
186
4
Listeria ivanovii subsp. ivanovii PAM 55
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
193
4
Listeria monocytogenes 08-5578
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
217
4
Oscillibacter valericigenes Sjm18-20
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Oscillospiraceae
/
Oscillibacter.
/
356
4
Paenibacillus polymyxa SC2
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
425
4
Staphylococcus aureus subsp. aureus MRSA252
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
132
4
Streptococcus mutans UA159
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
139
4
Streptococcus pneumoniae D39
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
103
4
Thermoanaerobacter tengcongensis MB4 (Caldanaerobacter subterraneus
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Caldanaerobacter.
/
152
4
Thermoanaerobacterium thermosaccharolyticum DSM 571
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Thermoanaerobacterium.
/
154
4
Bacillus megaterium WSH-002
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
334
4
Bacillus sp. JS
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
265
4
Bacillus subtilis subsp. subtilis str. RO-NN-1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
259
4
Bacillus thuringiensis serovar chinensis CT-43
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
377
4
Bacillus thuringiensis serovar finitimus YBT-020
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
342
4
Desulfosporosinus acidiphilus SJ4
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfosporosinus.
/
301
4
Lactobacillus casei LC2W
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
205
4
Lactococcus lactis subsp. cremoris A76
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
161
4
Leuconostoc mesenteroides subsp. mesenteroides J18
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
109
4
Selenomonas ruminantium subsp. lactilytica TAM6421
Bacteria
/
Firmicutes
/
Negativicutes
/
Selenomonadales
/
Veillonellaceae
/
Selenomonas.
/
130
4
Streptococcus pneumoniae INV200
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
100
4
Bacillus licheniformis 9945A
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
320
4
Clostridium stercorarium subsp. stercorarium DSM 8532
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
unclassified Ruminococcaceae.
/
148
4
Lactobacillus rhamnosus LOCK908
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
193
4
Staphylococcus aureus subsp. aureus ST228 plasmid pI7S6
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
3
4
Staphylococcus aureus subsp. aureus ST228 plasmid pI8T7
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
3
4
Streptococcus constellatus subsp. pharyngis C232
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
120
4
Streptococcus pyogenes HSC5
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
104
4
Bacillus toyonensis BCT-7112
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
321
4
Aerococcus urinae ACS-120-V-Col10a
Bacteria
/
Firmicutes
/
Lactobacillales
/
Aerococcaceae
/
Aerococcus.
/
89
3
Ammonifex degensii KC4
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Moorella group
/
Ammonifex.
/
101
3
Bacillus amyloliquefaciens FZB42
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
248
3
Bacillus cellulosilyticus DSM 2522
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
233
3
Bacillus cereus 03BB102
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
345
3
Bacillus pseudofirmus OF4
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
198
3
Bacillus subtilis subsp. spizizenii str. W23
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
265
3
Bacillus thuringiensis serovar konkukian str. 97-27
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
334
3
Clostridium beijerinckii NCIMB 8052
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
486
3
Clostridium botulinum A2 str. Kyoto
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
286
3
Clostridium cellulovorans 743B
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
297
3
Clostridium clariflavum DSM 19732
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
196
3
Clostridium ljungdahlii DSM 13528
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
354
3
Clostridium perfringens str. 13
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
138
3
Clostridium phytofermentans ISDg
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
311
3
Desulfotomaculum carboxydivorans CO-1-SRB
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfotomaculum.
/
132
3
Geobacillus sp. Y4.1MC1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
200
3
Heliobacterium modesticaldum Ice1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Heliobacteriaceae
/
Heliobacterium.
/
116
3
Lactobacillus acidophilus NCFM
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
107
3
Lactobacillus gasseri ATCC 33323
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
98
3
Lactobacillus plantarum subsp. plantarum ST-III
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
242
3
Lactobacillus plantarum WCFS1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
250
3
Leuconostoc citreum KM20
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
103
3
Listeria innocua Clip11262
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
209
3
Listeria monocytogenes 08-5923
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
215
3
Listeria monocytogenes HCC23
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
205
3
Paenibacillus polymyxa SC2 plasmid pSC2
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
16
3
Paenibacillus sp. JDR-2
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
670
3
Staphylococcus aureus RF122
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
125
3
Staphylococcus aureus subsp. aureus MSSA476
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
124
3
Staphylococcus epidermidis ATCC 12228
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
100
3
Staphylococcus pseudintermedius HKU10-03
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
124
3
Streptococcus agalactiae A909
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
119
3
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
133
3
Streptococcus pneumoniae 70585
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
108
3
Streptococcus sanguinis SK36
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
138
3
Streptococcus suis 98HAH33
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
109
3
Streptococcus thermophilus CNRZ1066
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
81
3
Syntrophomonas wolfei subsp. wolfei str. Goettingen
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Syntrophomonadaceae
/
Syntrophomonas.
/
99
3
Thermoanaerobacter italicus Ab9
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Thermoanaerobacter.
/
148
3
Bacillus cereus NC7401
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
348
3
Halobacillus halophilus DSM 2266
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Halobacillus.
/
187
3
Lactobacillus amylovorus GRL1118
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
93
3
Lactobacillus salivarius CECT 5713 plasmid pHN1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
3
Melissococcus plutonius DAT561
Bacteria
/
Firmicutes
/
Lactobacillales
/
Enterococcaceae
/
Melissococcus.
/
87
3
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
180
3
Streptococcus pneumoniae OXC141
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
101
3
Streptococcus thermophilus MN-ZLW-002
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
84
3
Streptococcus thermophilus ND03
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
79
3
Bacillus subtilis QB928
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
273
3
Bacillus subtilis subsp. subtilis str. BAB-1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
265
3
Bacillus thuringiensis HD-789
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
374
3
Bacillus thuringiensis serovar thuringiensis str. IS5056
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
377
3
Carnobacterium maltaromaticum LMA28
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Carnobacteriaceae
/
Carnobacterium.
/
293
3
Desulfosporosinus meridiei DSM 13257
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfosporosinus.
/
280
3
Enterococcus faecalis D32
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
210
3
Enterococcus faecalis str. Symbioflor 1
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
198
3
Enterococcus faecium NRRL B-2354 plasmid pNB2354_1
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
8
3
Geobacillus sp. GHH01
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
176
3
Lactobacillus paracasei subsp. paracasei 8700:2
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
390
3
Lactobacillus plantarum subsp. plantarum P-8
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
213
3
Staphylococcus aureus M1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
129
3
Streptococcus agalactiae ILRI005
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
120
3
Streptococcus agalactiae SA20-06
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
97
3
Streptococcus constellatus subsp. pharyngis C1050
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
119
3
Streptococcus constellatus subsp. pharyngis C818
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus
/
Streptococcus anginosus group.
/
120
3
Bacillus infantis NRRL B-14911
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
302
3
Bacillus thuringiensis YBT-1518
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
407
3
Enterococcus mundtii QU 25 plasmid pQY182
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
18
3
Streptococcus pneumoniae A026
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
111
3
Acidaminococcus fermentans DSM 20731
Bacteria
/
Firmicutes
/
Negativicutes
/
Selenomonadales
/
Acidaminococcaceae
/
Acidaminococcus.
/
124
2
Alkaliphilus metalliredigens QYMF
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Alkaliphilus.
/
315
2
Bacillus cereus Q1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
340
2
Bacillus cytotoxicus NVH 391-98
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
217
2
Bacillus megaterium QM B1551
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
362
2
Bacillus pumilus SAFR-032
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
260
2
Bacillus selenitireducens MLS10
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
184
2
Bacillus subtilis BSn5
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
265
2
Bacillus weihenstephanensis KBAB4
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
345
2
Butyrivibrio proteoclasticus B316
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Butyrivibrio.
/
140
2
Caldicellulosiruptor kristjanssonii 177R1B
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
137
2
Caldicellulosiruptor lactoaceticus 6A
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
115
2
Caldicellulosiruptor owensensis OL
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
105
2
Candidatus Desulforudis audaxviator MP104C
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Candidatus Desulforudis.
/
69
2
Clostridium botulinum A str. Hall
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
256
2
Clostridium botulinum F str. Langeland
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
282
2
Clostridium thermocellum ATCC 27405
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
154
2
Desulfotomaculum kuznetsovii DSM 6115
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfotomaculum.
/
188
2
Ethanoligenens harbinense YUAN-3
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
Ethanoligenens.
/
180
2
Finegoldia magna ATCC 29328
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiales Family XI. Incertae Sedis
/
Finegoldia.
/
73
2
Geobacillus sp. C56-T3
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
174
2
Halothermothrix orenii H 168
Bacteria
/
Firmicutes
/
Clostridia
/
Halanaerobiales
/
Halanaerobiaceae
/
Halothermothrix.
/
129
2
Lactobacillus brevis ATCC 367 plasmid 2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
3
2
Lactobacillus johnsonii NCC 533
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
109
2
Lactobacillus rhamnosus GG
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
193
2
Lactobacillus ruminis ATCC 27782
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
87
2
Lactobacillus sanfranciscensis TMW 1.1304
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
49
2
Lactococcus lactis subsp. lactis Il1403
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
149
2
Leuconostoc kimchii IMSNU 11154
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
130
2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
118
2
Lysinibacillus sphaericus C3-41
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Lysinibacillus.
/
304
2
Natranaerobius thermophilus JW/NM-WN-LF
Bacteria
/
Firmicutes
/
Clostridia
/
Natranaerobiales
/
Natranaerobiaceae
/
Natranaerobius.
/
140
2
Oceanobacillus iheyensis HTE831
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Oceanobacillus.
/
203
2
Oenococcus oeni PSU-1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Oenococcus.
/
95
2
Paenibacillus polymyxa E681
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
400
2
Ruminococcus albus 7
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Ruminococcaceae
/
Ruminococcus.
/
174
2
Staphylococcus aureus subsp. aureus ED98
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
129
2
Staphylococcus aureus subsp. aureus MW2
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
127
2
Staphylococcus aureus subsp. aureus USA300_TCH1516 plasmid pUSA300HOUMR
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
6
2
Staphylococcus carnosus subsp. carnosus TM300
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
134
2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
146
2
Streptococcus equi subsp. zooepidemicus
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
121
2
Streptococcus gordonii str. Challis substr. CH1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
131
2
Streptococcus mitis B6
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
114
2
Streptococcus mutans NN2025
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
138
2
Streptococcus pasteurianus ATCC 43144
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
142
2
Streptococcus pneumoniae 670-6B
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
125
2
Streptococcus pneumoniae JJA
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
106
2
Streptococcus pneumoniae Taiwan19F-14
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
114
2
Streptococcus pseudopneumoniae IS7493
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
121
2
Streptococcus thermophilus LMG 18311
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
75
2
Streptococcus uberis 0140J
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
113
2
Tetragenococcus halophilus NBRC 12172
Bacteria
/
Firmicutes
/
Lactobacillales
/
Enterococcaceae
/
Tetragenococcus.
/
172
2
Thermoanaerobacter sp. X513
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Thermoanaerobacter.
/
135
2
Thermoanaerobacter sp. X514
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Thermoanaerobacter.
/
136
2
Thermosediminibacter oceani DSM 16646
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Thermosediminibacter.
/
122
2
Bacillus amyloliquefaciens XH7
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
251
2
Candidatus Arthromitus sp. SFB-mouse-Yit
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Candidatus Arthromitus.
/
57
2
Clostridium acetobutylicum EA 2018
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
256
2
Halobacillus halophilus DSM 2266 plasmid PL16
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Halobacillus.
/
1
2
Lactobacillus casei BD-II plasmid pBD-II
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
2
Lactobacillus casei LC2W plasmid pLC2W
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
3
2
Lactobacillus johnsonii DPC 6026
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
98
2
Lactococcus lactis subsp. cremoris A76 plasmid pQA549
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
2
2
Listeria monocytogenes Finland 1998
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
206
2
Listeria monocytogenes L99
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
206
2
Listeria monocytogenes M7
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
207
2
Paenibacillus polymyxa M1 plasmid pPPM1a
Bacteria
/
Firmicutes
/
Bacillales
/
Paenibacillaceae
/
Paenibacillus.
/
20
2
Staphylococcus aureus subsp. aureus ECT-R 2
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
121
2
Staphylococcus aureus subsp. aureus ED133
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
129
2
Staphylococcus aureus subsp. aureus HO 5096 0412
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
129
2
Staphylococcus aureus subsp. aureus LGA251
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
124
2
Staphylococcus aureus subsp. aureus M013
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
129
2
Staphylococcus aureus subsp. aureus S0385
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
138
2
Staphylococcus aureus subsp. aureus str. JKD6008
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
135
2
Streptococcus pneumoniae INV104
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
103
2
Streptococcus pyogenes Alab49
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
108
2
Streptococcus salivarius 57.I
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
111
2
Streptococcus salivarius JIM8777
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
106
2
Streptococcus suis GZ1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
105
2
Bacillus amyloliquefaciens IT-45
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
255
2
Bacillus amyloliquefaciens subsp. plantarum AS43.3
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
250
2
Bacillus cereus FRI-35
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
342
2
Bacillus thuringiensis Bt407
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
382
2
Bacillus thuringiensis HD-771
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
375
2
Bacillus thuringiensis MC28
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
357
2
Desulfitobacterium dichloroeliminans LMG P-21439
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Desulfitobacterium.
/
212
2
Enterococcus casseliflavus EC20
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
282
2
Lactobacillus acidophilus La-14
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
109
2
Lactobacillus brevis KB290
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
181
2
Lactobacillus casei W56 plasmid pW56
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
2
Lactobacillus plantarum 16 plasmid Lp16I
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
2
Lactobacillus plantarum ZJ316
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
236
2
Lactobacillus reuteri TD1
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
96
2
Leuconostoc carnosum JB16
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Leuconostoc.
/
96
2
Leuconostoc gelidum JB7
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Leuconostoc.
/
131
2
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
209
2
Listeria monocytogenes serotype 4b str. LL195
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
202
2
Staphylococcus aureus CA-347
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
138
2
Staphylococcus aureus subsp. aureus CN1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
120
2
Streptococcus agalactiae 09mas018883
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
125
2
Streptococcus agalactiae GD201008-001
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
115
2
Streptococcus iniae SF1
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
124
2
Streptococcus mutans GS-5
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
133
2
Streptococcus suis TL13
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
111
2
Thermoanaerobacterium thermosaccharolyticum M0795
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Thermoanaerobacterium.
/
161
2
Vibrio parahaemolyticus O1:K33 str. CDC_K4557
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
156
2
Exiguobacterium sp. MH3
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillales Family XII. Incertae Sedis
/
Exiguobacterium.
/
193
2
Staphylococcus aureus subsp. aureus SA40
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
128
2
Staphylococcus aureus subsp. aureus SA957
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
132
2
Staphylococcus aureus subsp. aureus Z172
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
137
2
Streptococcus dysgalactiae subsp. equisimilis 167
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
143
2
Streptococcus sp. I-G2
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
94
2
Streptococcus sp. I-P16
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
88
2
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Bacteria
/
Firmicutes
/
Bacillales
/
Alicyclobacillaceae
/
Alicyclobacillus.
/
171
1
Alkaliphilus oremlandii OhILAs
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Alkaliphilus.
/
206
1
Bacillus anthracis str. Ames Ancestor plasmid pXO2
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
4
1
Bacillus anthracis str. CDC 684 plasmid pX01
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
7
1
Bacillus cereus 03BB102 plasmid p03BB102_179
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
6
1
Bacillus cereus AH187
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
351
1
Bacillus cereus E33L plasmid pE33L466
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
28
1
Caldicellulosiruptor obsidiansis OB47
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
119
1
Caldicellulosiruptor saccharolyticus DSM 8903
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
167
1
Candidatus Arthromitus sp. SFB-rat-Yit
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Candidatus Arthromitus.
/
47
1
Carboxydothermus hydrogenoformans Z-2901
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Carboxydothermus.
/
111
1
Carnobacterium sp. 17-4
Bacteria
/
Firmicutes
/
Lactobacillales
/
Carnobacteriaceae
/
Carnobacterium.
/
165
1
Clostridium acetobutylicum ATCC 824
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
250
1
Clostridium acetobutylicum DSM 1731
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
257
1
Clostridium botulinum A str. ATCC 19397
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
271
1
Clostridium botulinum B str. Eklund 17B
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
210
1
Clostridium botulinum BKT015925 plasmid p2BKT015925
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
10
1
Clostridium botulinum BKT015925 plasmid p4BKT015925
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
2
1
Clostridium botulinum E3 str. Alaska E43
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
191
1
Clostridium kluyveri NBRC 12016 plasmid pCKL1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
3
1
Clostridium lentocellum DSM 5427
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Cellulosilyticum.
/
269
1
Clostridium tetani E88 plasmid pE88
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
5
1
Eubacterium eligens ATCC 27750
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
108
1
Eubacterium limosum KIST612
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
349
1
Exiguobacterium sibiricum 255-15
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillales Family XII. Incertae Sedis
/
Exiguobacterium.
/
165
1
Geobacillus sp. WCH70
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
140
1
Geobacillus thermodenitrificans NG80-2 plasmid pLW1071
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
1
1
Geobacillus thermoleovorans CCB_US3_UF5
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
169
1
Lactobacillus brevis ATCC 367
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
163
1
Lactobacillus buchneri NRRL B-30929
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
132
1
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
1
Lactobacillus casei BL23
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
206
1
Lactobacillus crispatus ST1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
117
1
Lactobacillus plantarum JDM1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
237
1
Lactococcus lactis subsp. cremoris SK11
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
164
1
Lactococcus lactis subsp. cremoris SK11 plasmid 3
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
4
1
Lactococcus lactis subsp. cremoris SK11 plasmid 4
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
4
1
Leuconostoc citreum KM20 plasmid pLCK2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
1
1
Leuconostoc sp. C2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
125
1
Listeria monocytogenes serotype 4b str. F2365
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
204
1
Macrococcus caseolyticus JCSC5402 plasmid pMCCL2
Bacteria
/
Firmicutes
/
Bacillales
/
Macrococcus.
/
6
1
Melissococcus plutonius ATCC 35311
Bacteria
/
Firmicutes
/
Lactobacillales
/
Enterococcaceae
/
Melissococcus.
/
94
1
Moorella thermoacetica ATCC 39073
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Moorella group
/
Moorella.
/
144
1
Roseburia hominis A2-183
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Roseburia.
/
236
1
Selenomonas sputigena ATCC 35185
Bacteria
/
Firmicutes
/
Negativicutes
/
Selenomonadales
/
Veillonellaceae
/
Selenomonas.
/
74
1
Staphylococcus aureus subsp. aureus COL
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
128
1
Staphylococcus aureus subsp. aureus JH9
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
138
1
Staphylococcus aureus subsp. aureus Mu3
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
137
1
Staphylococcus aureus subsp. aureus Mu50
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
137
1
Staphylococcus aureus subsp. aureus N315
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
127
1
Staphylococcus aureus subsp. aureus USA300_FPR3757
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
131
1
Streptococcus equi subsp. equi 4047
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
119
1
Streptococcus equi subsp. zooepidemicus MGCS10565
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
120
1
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
180
1
Streptococcus gallolyticus UCN34
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
177
1
Streptococcus parasanguinis ATCC 15912
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
117
1
Streptococcus pneumoniae Hungary19A-6
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
114
1
Streptococcus pneumoniae P1031
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
105
1
Streptococcus pneumoniae TIGR4
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
108
1
Streptococcus pyogenes SSI-1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
107
1
Streptococcus suis BM407 plasmid pBM407
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
2
1
Streptococcus suis ST3
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
99
1
Syntrophobotulus glycolicus DSM 8271
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptococcaceae
/
Syntrophobotulus.
/
242
1
Syntrophothermus lipocalidus DSM 12680
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Syntrophomonadaceae
/
Syntrophothermus.
/
106
1
Tepidanaerobacter sp. Re1
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Tepidanaerobacter.
/
154
1
Thermaerobacter marianensis DSM 12885
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiales Family XVII. Incertae Sedis
/
Thermaerobacter.
/
131
1
Thermoanaerobacter mathranii subsp. mathranii str. A3
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Thermoanaerobacter.
/
130
1
Thermoanaerobacter pseudethanolicus ATCC 33223
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Thermoanaerobacter.
/
139
1
Weissella koreensis KACC 15510 plasmid WKp2903
Bacteria
/
Firmicutes
/
Lactobacillales
/
Weissella.
/
4
1
Bacillus amyloliquefaciens TA208
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
255
1
Bacillus anthracis str. H9401 (Bacillus anthracis NCCP 12889) plasmid BAP1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
9
1
Bacillus cereus F837/76
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
337
1
Clostridium sp. BNL1100
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
249
1
Clostridium thermocellum DSM 1313
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
128
1
Enterococcus faecium DO
Bacteria
/
Firmicutes
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
194
1
Lactobacillus amylovorus GRL1118 plasmid plasmid2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
5
1
Lactobacillus rhamnosus ATCC 8530
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
197
1
Lactobacillus salivarius CECT 5713 plasmid pHN2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
1
Lactococcus lactis subsp. cremoris NZ9000
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
178
1
Listeria monocytogenes 07PF0776
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
203
1
Listeria monocytogenes 10403S
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
211
1
Pediococcus claussenii ATCC BAA-344
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Pediococcus.
/
116
1
Staphylococcus aureus subsp. aureus JKD6159
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
124
1
Staphylococcus aureus subsp. aureus MSHR1132
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
127
1
Staphylococcus aureus subsp. aureus T0131
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
139
1
Staphylococcus aureus subsp. aureus TCH60
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
129
1
Staphylococcus aureus subsp. aureus TW20
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
138
1
Staphylococcus aureus subsp. aureus TW20 plasmid pTW20_1
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
6
1
Staphylococcus aureus subsp. aureus VC40
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
122
1
Staphylococcus lugdunensis N920143
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
137
1
Staphylococcus pseudintermedius ED99
Bacteria
/
Firmicutes
/
Bacillales
/
Staphylococcus.
/
118
1
Streptococcus mutans LJ23
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
141
1
Streptococcus pneumoniae ST556
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
123
1
Streptococcus pyogenes MGAS15252
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
100
1
Streptococcus pyogenes MGAS1882
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
102
1
Streptococcus suis A7
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
102
1
Streptococcus suis JS14
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
109
1
Streptococcus suis SS12
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
108
1
Streptococcus thermophilus JIM 8232
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
94
1
Thermoanaerobacterium saccharolyticum JW/SL-YS485
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Thermoanaerobacterium.
/
156
1
Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Thermoanaerobacterium.
/
1
1
Amphibacillus xylanus NBRC 15112
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Amphibacillus.
/
138
1
Bacillus amyloliquefaciens subsp. plantarum UCMB5036
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
243
1
Bacillus amyloliquefaciens subsp. plantarum UCMB5113
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
243
1
Bacillus anthracis str. A2012 plasmid pXO2
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
5
1
Bacillus subtilis subsp. subtilis 6051-HGW
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
282
1
Bacillus thuringiensis MC28 plasmid pMC189
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
8
1
Bacillus thuringiensis MC28 plasmid pMC429
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
32
1
Enterococcus faecalis D32 plasmid EFD32pA
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
2
1
Enterococcus faecium Aus0004
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
212
1
Enterococcus faecium Aus0085 plasmid p1
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
7
1
Exiguobacterium antarcticum B7
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillales Family XII. Incertae Sedis
/
Exiguobacterium.
/
141
1
Geobacillus sp. JF8
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
168
1
Halobacteroides halobius DSM 5150
Bacteria
/
Firmicutes
/
Clostridia
/
Halanaerobiales
/
Halobacteroidaceae
/
Halobacteroides.
/
117
1
Lactobacillus brevis KB290 plasmid pKB290-3
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
3
1
Lactobacillus plantarum 16
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
225
1
Lactobacillus plantarum 16 plasmid Lp16C
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
1
Lactobacillus plantarum 16 plasmid Lp16E
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
1
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp5
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
1
Lactobacillus reuteri I5007
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
99
1
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
213
1
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
213
1
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
212
1
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
214
1
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
216
1
Listeria monocytogenes
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
216
1
Listeria monocytogenes SLCC2372 plasmid pLM1-2cUG1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
8
1
Listeria monocytogenes SLCC2378
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
208
1
Listeria monocytogenes SLCC2540
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
209
1
Listeria monocytogenes SLCC2755
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
207
1
Listeria monocytogenes SLCC2755 plasmid pLM1-2bUG1
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Listeriaceae
/
Listeria.
/
8
1
Staphylococcus aureus subsp. aureus 55/2053
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
129
1
Staphylococcus aureus subsp. aureus 6850
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
127
1
Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
2
1
Staphylococcus warneri SG1 plasmid unnamed
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Staphylococcus.
/
5
1
Streptococcus agalactiae
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
89
1
Streptococcus agalactiae ILRI112
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
117
1
Streptococcus pneumoniae gamPNI0373
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
107
1
Streptococcus pneumoniae SPN034156
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
101
1
Streptococcus pneumoniae SPN034183
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
101
1
Streptococcus pneumoniae SPN994038
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
101
1
Streptococcus pneumoniae SPN994039
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
101
1
Streptococcus suis S735
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
100
1
Streptococcus suis SC070731
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Streptococcus.
/
108
1
Thermobacillus composti KWC4 plasmid pTHECO01
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Paenibacillaceae
/
Thermobacillus.
/
3
1
Bacillus amyloliquefaciens LFB112
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
246
1
Bacillus thuringiensis YBT-1518 plasmid pBMB0232
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
13
1
Bacillus toyonensis BCT-7112 plasmid pBCT77
Bacteria
/
Firmicutes
/
Bacilli
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
6
1
Carnobacterium sp. WN1359
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Carnobacteriaceae
/
Carnobacterium.
/
122
1
Clostridium tetani 12124569
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
172
1
Enterococcus mundtii QU 25
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
209
1
Lactococcus lactis subsp. cremoris KW2
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
157
1
Pediococcus pentosaceus SL4
Bacteria
/
Firmicutes
/
Bacilli
/
Lactobacillales
/
Lactobacillaceae
/
Pediococcus.
/
116
1
Acetohalobium arabaticum DSM 5501
Bacteria
/
Firmicutes
/
Clostridia
/
Halanaerobiales
/
Halobacteroidaceae
/
Acetohalobium.
/
91
0
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI02
Bacteria
/
Firmicutes
/
Bacillales
/
Alicyclobacillaceae
/
Alicyclobacillus.
/
5
0
Ammonifex degensii KC4 plasmid pADEG01
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacteraceae
/
Moorella group
/
Ammonifex.
/
6
0
Anaerococcus prevotii DSM 20548
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiales Family XI. Incertae Sedis
/
Anaerococcus.
/
90
0
Anaerococcus prevotii DSM 20548 plasmid pAPRE01
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiales Family XI. Incertae Sedis
/
Anaerococcus.
/
7
0
Bacillus anthracis str. A0248 plasmid pXO1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
7
0
Bacillus anthracis str. A0248 plasmid pXO2
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
4
0
Bacillus anthracis str. Ames Ancestor plasmid pXO1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
7
0
Bacillus anthracis str. CDC 684 plasmid pX02
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
7
0
Bacillus cereus AH187 plasmid pAH187_270
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
20
0
Bacillus cereus AH187 plasmid pAH187_45
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
4
0
Bacillus cereus AH820 plasmid pAH820_272
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
24
0
Bacillus cereus ATCC 10987 plasmid pBc10987
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
12
0
Bacillus cereus ATCC 14579
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
334
0
Bacillus cereus ATCC 14579 plasmid pBClin15
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
2
0
Bacillus cereus B4264
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
337
0
Bacillus cereus biovar anthracis str. CI plasmid pBAslCI14
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
1
0
Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
9
0
Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
7
0
Bacillus cereus E33L plasmid pE33L54
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
6
0
Bacillus cereus E33L plasmid pE33L9
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
3
0
Bacillus cereus G9842
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
340
0
Bacillus cereus G9842 plasmid pG9842_140
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
4
0
Bacillus cereus G9842 plasmid pG9842_209
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
10
0
Bacillus cereus Q1 plasmid pBc239
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
21
0
Bacillus cereus Q1 plasmid pBc53
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
6
0
Bacillus coagulans 36D1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
183
0
Bacillus megaterium QM B1551 plasmid pBM100
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
3
0
Bacillus megaterium QM B1551 plasmid pBM300
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
1
0
Bacillus megaterium QM B1551 plasmid pBM400
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
3
0
Bacillus megaterium QM B1551 plasmid pBM500
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
10
0
Bacillus megaterium QM B1551 plasmid pBM600
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
6
0
Bacillus megaterium QM B1551 plasmid pBM700
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
21
0
Bacillus pseudofirmus OF4 plasmid pBpOF4-01
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
11
0
Bacillus pseudofirmus OF4 plasmid pBpOF4-02
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
8
0
Bacillus subtilis subsp. subtilis str. 168
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus.
/
280
0
Bacillus thuringiensis BMB171 (Bacillus thuringiensis serovar plasmid pBMB171
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
25
0
Bacillus thuringiensis serovar konkukian str. 97-27 plasmid pBT9727
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
2
0
Bacillus thuringiensis str. Al Hakam plasmid pALH1
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
5
0
Bacillus weihenstephanensis KBAB4 plasmid pBWB401
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
25
0
Bacillus weihenstephanensis KBAB4 plasmid pBWB402
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
3
0
Bacillus weihenstephanensis KBAB4 plasmid pBWB403
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
3
0
Bacillus weihenstephanensis KBAB4 plasmid pBWB404
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Bacillus
/
Bacillus cereus group.
/
4
0
Butyrivibrio proteoclasticus B316
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Butyrivibrio.
/
19
0
Butyrivibrio proteoclasticus B316 plasmid pCY186
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Butyrivibrio.
/
9
0
Butyrivibrio proteoclasticus B316 plasmid pCY360
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Lachnospiraceae
/
Butyrivibrio.
/
8
0
Caldicellulosiruptor bescii DSM 6725
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
141
0
Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
2
0
Caldicellulosiruptor kristjanssonii 177R1B plasmid pCALKR01
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
1
0
Caldicellulosiruptor kronotskyensis 2002
Bacteria
/
Firmicutes
/
Clostridia
/
Thermoanaerobacterales
/
Thermoanaerobacterales Family III. Incertae Sedis
/
Caldicellulosiruptor.
/
120
0
Candidatus Arthromitus sp. SFB-mouse-Japan
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Candidatus Arthromitus.
/
64
0
Carnobacterium sp. 17-4 plasmid pCAR50
Bacteria
/
Firmicutes
/
Lactobacillales
/
Carnobacteriaceae
/
Carnobacterium.
/
8
0
Clostridiales genomosp. BVAB3 str. UPII9-5
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales.
/
81
0
Clostridium acetobutylicum ATCC 824 plasmid pSOL1
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
22
0
Clostridium acetobutylicum DSM 1731 plasmid pSMBa
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
22
0
Clostridium botulinum A3 str. Loch Maree plasmid pCLK
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
8
0
Clostridium botulinum B str. Eklund 17B plasmid pCLL
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
6
0
Clostridium botulinum B1 str. Okra plasmid pCLD
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
3
0
Clostridium botulinum Ba4 str. 657 plasmid pCLJ
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
9
0
Clostridium botulinum BKT015925
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
134
0
Clostridium botulinum BKT015925 plasmid p1BKT015925
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
12
0
Clostridium botulinum BKT015925 plasmid p3BKT015925
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
7
0
Clostridium botulinum BKT015925 plasmid p5BKT015925
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
2
0
Clostridium botulinum F str. Langeland plasmid pCLI
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
3
0
Clostridium kluyveri DSM 555 plasmid pCKL555A
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
5
0
Clostridium novyi NT
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
117
0
Clostridium perfringens ATCC 13124
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
155
0
Clostridium perfringens str. 13 plasmid pCP13
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
5
0
Clostridium sticklandii DSM 519
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiaceae
/
Clostridium.
/
129
0
Enterococcus faecalis V583 plasmid pTEF1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
3
0
Enterococcus faecalis V583 plasmid pTEF2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Enterococcaceae
/
Enterococcus.
/
2
0
Erysipelothrix rhusiopathiae str. Fujisawa
Bacteria
/
Firmicutes
/
Erysipelotrichi
/
Erysipelotrichales
/
Erysipelotrichaceae
/
Erysipelothrix.
/
121
0
Eubacterium eligens ATCC 27750 plasmid unnamed
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
10
0
Eubacterium eligens ATCC 27750 plasmid unnamed
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
51
0
Eubacterium rectale ATCC 33656
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Eubacteriaceae
/
Eubacterium.
/
220
0
Exiguobacterium sibiricum 255-15 plasmid pEXIG02
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillales Family XII. Incertae Sedis
/
Exiguobacterium.
/
1
0
Exiguobacterium sp. AT1b
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillales Family XII. Incertae Sedis
/
Exiguobacterium.
/
163
0
Filifactor alocis ATCC 35896
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Peptostreptococcaceae
/
Filifactor.
/
76
0
Finegoldia magna ATCC 29328 plasmid pFMC
Bacteria
/
Firmicutes
/
Clostridia
/
Clostridiales
/
Clostridiales Family XI. Incertae Sedis
/
Finegoldia.
/
3
0
Geobacillus kaustophilus HTA426
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
172
0
Geobacillus kaustophilus HTA426 plasmid pHTA426
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
1
0
Geobacillus sp. Y4.1MC1 plasmid pGY4MC101
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
9
0
Geobacillus sp. Y412MC52
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
177
0
Geobacillus sp. Y412MC52 plasmid pGYMC5201
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
2
0
Geobacillus sp. Y412MC61
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
180
0
Geobacillus sp. Y412MC61 plasmid pGYMC6101
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
2
0
Geobacillus thermoglucosidasius C56-YS93 plasmid pGEOTH01
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
8
0
Geobacillus thermoglucosidasius C56-YS93 plasmid pGEOTH02
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Geobacillus.
/
1
0
Halanaerobium hydrogeniformans
Bacteria
/
Firmicutes
/
Clostridia
/
Halanaerobiales
/
Halanaerobiaceae
/
Halanaerobium.
/
113
0
Lactobacillus brevis ATCC 367 plasmid 1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
3
0
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC02
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
0
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC03
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
0
Lactobacillus casei ATCC 334
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
173
0
Lactobacillus casei ATCC 334 plasmid 1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
0
Lactobacillus casei str. Zhang
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
184
0
Lactobacillus casei str. Zhang plasmid plca36
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
0
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
65
0
Lactobacillus delbrueckii subsp. bulgaricus ND02 plasmid unnamed
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
0
Lactobacillus johnsonii FI9785
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
78
0
Lactobacillus johnsonii FI9785 plasmid p9785L
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
0
Lactobacillus kefiranofaciens ZW3 plasmid pWW1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
7
0
Lactobacillus kefiranofaciens ZW3 plasmid pWW2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
0
Lactobacillus plantarum subsp. plantarum ST-III plasmid pST-III
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
5
0
Lactobacillus plantarum WCFS1 plasmid pWCFS103
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
4
0
Lactobacillus reuteri DSM 20016
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
96
0
Lactobacillus reuteri SD2112 plasmid pLR581
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
3
0
Lactobacillus reuteri SD2112 plasmid pLR584
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
0
Lactobacillus reuteri SD2112 plasmid pLR585
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
0
Lactobacillus rhamnosus Lc 705
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
201
0
Lactobacillus rhamnosus Lc 705 plasmid pLC1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
3
0
Lactobacillus sakei subsp. sakei 23K
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
138
0
Lactobacillus salivarius UCC118 plasmid pMP118
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
18
0
Lactobacillus salivarius UCC118 plasmid pSF118-20
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
2
0
Lactobacillus salivarius UCC118 plasmid pSF118-44
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
73
0
Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
5
0
Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Lactobacillaceae
/
Lactobacillus.
/
1
0
Lactococcus garvieae ATCC 49156
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
104
0
Lactococcus lactis subsp. cremoris SK11 plasmid 1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
1
0
Lactococcus lactis subsp. cremoris SK11 plasmid 2
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
2
0
Lactococcus lactis subsp. lactis KF147
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
161
0
Lactococcus lactis subsp. lactis KF147 plasmid pKF147A
Bacteria
/
Firmicutes
/
Lactobacillales
/
Streptococcaceae
/
Lactococcus.
/
7
0
Leuconostoc citreum KM20 plasmid pLCK1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
3
0
Leuconostoc citreum KM20 plasmid pLCK3
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
6
0
Leuconostoc citreum KM20 plasmid pLCK4
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
2
0
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4701
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
2
0
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4704
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
2
0
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4719
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
1
0
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4726
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
1
0
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 plasmid pLEUM1
Bacteria
/
Firmicutes
/
Lactobacillales
/
Leuconostoc.
/
3
0
Listeria innocua Clip11262 plasmid pLI100
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
9
0
Listeria monocytogenes 08-5578 plasmid pLM5578
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
5
0
Listeria monocytogenes EGD-e
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
216
0
Listeria monocytogenes serotype 4b str. CLIP 80459
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
203
0
Listeria seeligeri serovar 1/2b str. SLCC3954
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
185
0
Listeria welshimeri serovar 6b str. SLCC5334
Bacteria
/
Firmicutes
/
Bacillales
/
Listeriaceae
/
Listeria.
/
186
0
Lysinibacillus sphaericus C3-41 plasmid pBsph
Bacteria
/
Firmicutes
/
Bacillales
/
Bacillaceae
/
Lysinibacillus.
/
7
0
Macrococcus caseolyticus JCSC5402 plasmid pMCCL1
Bacteria
/
Firmicutes
/
Bacillales
/
Macrococcus.
/
1
0