Genomes

Organism	Lineage	Transcription Factor	misPredicted TF protein
Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acidiphilium multivorum AIU301 plasmid pACMV6	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acidiphilium. /	1	0
Aeromonas salmonicida subsp. salmonicida A449 plasmid pAsa1	Bacteria / Proteobacteria / Gammaproteobacteria / Aeromonadales / Aeromonadaceae / Aeromonas. /	1	0
Aeromonas salmonicida subsp. salmonicida A449 plasmid pAsa2	Bacteria / Proteobacteria / Gammaproteobacteria / Aeromonadales / Aeromonadaceae / Aeromonas. /	1	0
Aeromonas salmonicida subsp. salmonicida A449 plasmid pAsa3	Bacteria / Proteobacteria / Gammaproteobacteria / Aeromonadales / Aeromonadaceae / Aeromonas. /	1	0
Aggregatibacter actinomycetemcomitans D11S-1 plasmid S57	Bacteria / Proteobacteria / Gammaproteobacteria / Pasteurellales / Pasteurellaceae / Aggregatibacter. /	1	0
Agrobacterium radiobacter K84 plasmid pAgK84	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Rhizobiaceae / Rhizobium/Agrobacterium group / Agrobacterium. /	1	1
Allochromatium vinosum DSM 180 plasmid pALVIN02	Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Chromatiaceae / Allochromatium. /	1	1
Amycolicicoccus subflavus DQS3-9A1 plasmid pAS9A-1	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Amycolicicoccus. /	1	0
Aquifex aeolicus VF5 plasmid ece1	Bacteria / Aquificae / Aquificales / Aquificaceae / Aquifex. /	1	1
Arthrobacter arilaitensis Re117 plasmid pRE117-2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Micrococcineae / Micrococcaceae / Arthrobacter. /	1	0
Bacillus cereus biovar anthracis str. CI plasmid pBAslCI14	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus megaterium QM B1551 plasmid pBM300	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus. /	1	0
Borrelia burgdorferi B31 plasmid lp38	Bacteria / Spirochaetes / Spirochaetales / Spirochaetaceae / Borrelia / Borrelia burgdorferi group. /	1	0
Borrelia duttonii Ly plasmid pl40	Bacteria / Spirochaetes / Spirochaetales / Spirochaetaceae / Borrelia. /	1	0
Caldicellulosiruptor kristjanssonii 177R1B plasmid pCALKR01	Bacteria / Firmicutes / Clostridia / Thermoanaerobacterales / Thermoanaerobacterales Family III. Incertae Sedis / Caldicellulosiruptor. /	1	0
Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet	Bacteria / Proteobacteria / Epsilonproteobacteria / Campylobacterales / Campylobacteraceae / Campylobacter. /	1	0
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG1	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Candidatus Azobacteroides. /	1	0
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG2	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Candidatus Azobacteroides. /	1	0
Candidatus Carsonella ruddii PV	Bacteria / Proteobacteria / Gammaproteobacteria / Candidatus Carsonella. /	1	0
Candidatus Hodgkinia cicadicola Dsem	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Candidatus Hodgkinia. /	1	0
Candidatus Sulcia muelleri CARI	Bacteria / Bacteroidetes / Flavobacteriia / Flavobacteriales / Candidatus Sulcia. /	1	0
Candidatus Sulcia muelleri DMIN	Bacteria / Bacteroidetes / Flavobacteriia / Flavobacteriales / Candidatus Sulcia. /	1	0
Candidatus Sulcia muelleri GWSS	Bacteria / Bacteroidetes / Flavobacteriia / Flavobacteriales / Candidatus Sulcia. /	1	0
Candidatus Sulcia muelleri SMDSEM	Bacteria / Bacteroidetes / Flavobacteriia / Flavobacteriales / Candidatus Sulcia. /	1	0
Candidatus Zinderia insecticola CARI	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Oxalobacteraceae / Candidatus Zinderia. /	1	0
Chelativorans sp. BNC1 plasmid 3	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Phyllobacteriaceae / Chelativorans. /	1	0
Citrobacter koseri ATCC BAA-895 plasmid pCKO3	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Citrobacter. /	1	0
Corynebacterium glutamicum R plasmid pCGR1	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Corynebacteriaceae / Corynebacterium. /	1	3
Corynebacterium jeikeium K411 plasmid pKW4	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Corynebacteriaceae / Corynebacterium. /	1	0
Cronobacter turicensis z3032 plasmid pCTU2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Cronobacter. /	1	0
Cyanothece sp. ATCC 51142 plasmid D	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	1	0
Cyanothece sp. PCC 7424 plasmid pP742404	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	1	0
Cyanothece sp. PCC 7424 plasmid pP742405	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	1	0
Cyanothece sp. PCC 7425 plasmid pP742503	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	1	0
Cyanothece sp. PCC 8802 plasmid pP880202	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	1	0
Cyanothece sp. PCC 8802 plasmid pP880204	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	1	0
Enterobacter asburiae LF7a plasmid pENTAS02	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Enterobacter / Enterobacter cloacae complex. /	1	0
Erwinia amylovora ATCC 49946 plasmid 2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	1	0
Erwinia tasmaniensis Et1/99 plasmid pET09	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	1	0
Escherichia coli O111:H- str. 11128 plasmid pO111_2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli O157:H7 str. EC4115 plasmid pEC4115	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli O55:H7 str. CB9615 plasmid pO55	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	1
Escherichia coli SE11 plasmid pSE11-2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	1
Exiguobacterium sibiricum 255-15 plasmid pEXIG02	Bacteria / Firmicutes / Bacillales / Bacillales Family XII. Incertae Sedis / Exiguobacterium. /	1	0
Geobacillus kaustophilus HTA426 plasmid pHTA426	Bacteria / Firmicutes / Bacillales / Bacillaceae / Geobacillus. /	1	0
Geobacillus thermodenitrificans NG80-2 plasmid pLW1071	Bacteria / Firmicutes / Bacillales / Bacillaceae / Geobacillus. /	1	1
Geobacillus thermoglucosidasius C56-YS93 plasmid pGEOTH02	Bacteria / Firmicutes / Bacillales / Bacillaceae / Geobacillus. /	1	0
Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIPal5II	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Gluconacetobacter. /	1	0
Gluconacetobacter xylinus NBRC 3288 plasmid pGXY050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Gluconacetobacter. /	1	0
Gluconobacter oxydans 621H plasmid pGOX4	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Gluconobacter. /	1	0
Isosphaera pallida ATCC 43644 plasmid pISOP01	Bacteria / Planctomycetes / Planctomycetia / Planctomycetales / Planctomycetaceae / Isosphaera. /	1	0
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN6	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Klebsiella. /	1	0
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC03	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus delbrueckii subsp. bulgaricus ND02 plasmid unnamed	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus johnsonii FI9785 plasmid p9785L	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus kefiranofaciens ZW3 plasmid pWW2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactococcus lactis subsp. cremoris SK11 plasmid 1	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	1	0
Lawsonia intracellularis PHE/MN1-00 plasmid 2	Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. /	1	0
Leuconostoc citreum KM20 plasmid pLCK2	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	1	1
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4719	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	1	0
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4726	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	1	0
Macrococcus caseolyticus JCSC5402 plasmid pMCCL1	Bacteria / Firmicutes / Bacillales / Macrococcus. /	1	0
Marinitoga piezophila KA3 plasmid pMARPI01	Bacteria / Thermotogae / Thermotogales / Thermotogaceae / Marinitoga. /	1	0
Methylobacterium radiotolerans JCM 2831 plasmid pMRAD02	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	1	2
Methylovorus glucosetrophus SIP3-4 plasmid pMsip02	Bacteria / Proteobacteria / Betaproteobacteria / Methylophilales / Methylophilaceae / Methylovorus. /	1	0
Nitrosococcus halophilus Nc4 plasmid pNHAL01	Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Chromatiaceae / Nitrosococcus. /	1	0
Nitrosococcus watsonii C-113 plasmid pNWAT02	Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Chromatiaceae / Nitrosococcus. /	1	0
Nitrosospira multiformis ATCC 25196 plasmid 2	Bacteria / Proteobacteria / Betaproteobacteria / Nitrosomonadales / Nitrosomonadaceae / Nitrosospira. /	1	0
Nostoc azollae 0708 plasmid pAzo01	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Trichormus. /	1	0
Nostoc sp. PCC 7120 (Anabaena sp. PCC7120) plasmid pCC7120epsilon	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Nostoc. /	1	0
Oceanithermus profundus DSM 14977 plasmid pOCEPR01	Bacteria / Deinococcus-Thermus / Deinococci / Thermales / Thermaceae / Oceanithermus. /	1	0
Photobacterium profundum SS9 plasmid pPBPR1	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Photobacterium. /	1	0
Photorhabdus asymbiotica plasmid pPAU1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Photorhabdus. /	1	0
Planctomyces limnophilus DSM 3776 plasmid pPLIM01	Bacteria / Planctomycetes / Planctomycetia / Planctomycetales / Planctomycetaceae / Planctomyces. /	1	0
Polaromonas naphthalenivorans CJ2 plasmid pPNAP06	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Polaromonas. /	1	0
Pseudonocardia dioxanivorans CB1190 plasmid pPSED03	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Pseudonocardineae / Pseudonocardiaceae / Pseudonocardia. /	1	0
Psychrobacter sp. PRwf-1 plasmid pRWF101	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Psychrobacter. /	1	0
Ralstonia pickettii 12J plasmid pRPIC01	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Ralstonia. /	1	1
Rhodococcus erythropolis PR4 plasmid pREC2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Nocardiaceae / Rhodococcus. /	1	0
Rhodopseudomonas palustris CGA009 plasmid pRPA	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Bradyrhizobiaceae / Rhodopseudomonas. /	1	0
Rickettsia felis URRWXCal2 plasmid pRFdelta	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	1	0
Rickettsia peacockii str. Rustic plasmid pRPR	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	1	0
Roseobacter denitrificans OCh 114 plasmid pTB3	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Roseobacter. /	1	0
Ruminococcus albus 7 plasmid pRUMAL04	Bacteria / Firmicutes / Clostridia / Clostridiales / Ruminococcaceae / Ruminococcus. /	1	0
Runella slithyformis DSM 19594 plasmid pRUNSL05	Bacteria / Bacteroidetes / Cytophagia / Cytophagales / Cytophagaceae / Runella. /	1	0
Salinibacter ruber M8 plasmid pSR11	Bacteria / Bacteroidetes / Bacteroidetes Order II. Incertae sedis / Rhodothermaceae / Salinibacter. /	1	0
Serratia proteamaculans 568 plasmid pSPRO01	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Serratia. /	1	1
Shewanella sp. MR-7 plasmid Plasmid1	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Shewanellaceae / Shewanella. /	1	0
Shigella dysenteriae Sd197 plasmid pSD197_spA	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Shigella. /	1	0
Shigella dysenteriae Sd197 plasmid pSD1_197	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Shigella. /	1	3
Shigella sonnei Ss046 plasmid pSS046_spA	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Shigella. /	1	0
Spirosoma linguale DSM 74 plasmid pSLIN08	Bacteria / Bacteroidetes / Cytophagia / Cytophagales / Cytophagaceae / Spirosoma. /	1	0
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-06	Bacteria / Firmicutes / Bacillales / Staphylococcus. /	1	0
Staphylococcus haemolyticus JCSC1435 plasmid pSHaeB	Bacteria / Firmicutes / Bacillales / Staphylococcus. /	1	0
Staphylococcus haemolyticus JCSC1435 plasmid pSHaeC	Bacteria / Firmicutes / Bacillales / Staphylococcus. /	1	0
Streptococcus macedonicus plasmid pSMA198	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Streptococcus. /	1	0
Synechococcus sp. PCC 7002 plasmid pAQ5	Bacteria / Cyanobacteria / Chroococcales / Synechococcus. /	1	0
Thermovirga lienii DSM 17291 plasmid pTLIE01	Bacteria / Synergistetes / Synergistia / Synergistales / Synergistaceae / Thermovirga. /	1	0
Verminephrobacter eiseniae EF01-2 plasmid pVEIS01	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Verminephrobacter. /	1	0
Vibrio fischeri ES114 plasmid pES100	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. /	1	0
Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV38	Bacteria / Proteobacteria / Gammaproteobacteria / Xanthomonadales / Xanthomonadaceae / Xanthomonas. /	1	1
Yersinia pestis Z176003 plasmid pPCP1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	1	1
Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	1	0
Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-040	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-050	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Bacillus cereus F837/76 plasmid pF837_10	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus cereus NC7401 plasmid pNC2	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus megaterium WSH-002 plasmid WSH-002_p3	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus. /	1	0
Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT6880	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT8513	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT9547	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Borrelia burgdorferi JD1 plasmid JD1 lp38	Bacteria / Spirochaetes / Spirochaetales / Spirochaetaceae / Borrelia / Borrelia burgdorferi group. /	1	0
Borrelia burgdorferi N40 plasmid N40_cp32-9	Bacteria / Spirochaetes / Spirochaetales / Spirochaetaceae / Borrelia / Borrelia burgdorferi group. /	1	0
Borrelia burgdorferi N40 plasmid N40_lp38	Bacteria / Spirochaetes / Spirochaetales / Spirochaetaceae / Borrelia / Borrelia burgdorferi group. /	1	0
Brachyspira intermedia PWS/A plasmid pInt	Bacteria / Spirochaetes / Spirochaetales / Brachyspiraceae / Brachyspira. /	1	0
Burkholderia sp. KJ006 plasmid pKJ006	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Burkholderia. /	1	4
Candidatus Rickettsia amblyommii str. GAT-30V plasmid pMCE_3	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	1	0
Candidatus Tremblaya princeps PCVAL	Bacteria / Proteobacteria / Betaproteobacteria / Candidatus Tremblaya. /	1	0
Escherichia coli 042 plasmid pAA	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli ABU 83972 plasmid pABU	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli ETEC H10407 plasmid p58	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli O55:H7 str. RM12579 plasmid p12579_2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	2
Escherichia coli O7:K1 str. CE10 plasmid pCE10A	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli O7:K1 str. CE10 plasmid pCE10C	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli O7:K1 str. CE10 plasmid pCE10D	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli UMNK88 plasmid pUMNK88_91	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	1
Escherichia coli UMNK88 plasmid pUMNK88_Ent	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli UMNK88 plasmid pUMNK88_Hly	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	1
Halobacillus halophilus DSM 2266 plasmid PL16	Bacteria / Firmicutes / Bacillales / Bacillaceae / Halobacillus. /	1	2
Helicobacter pylori HUP-B14 plasmid pHPB14	Bacteria / Proteobacteria / Epsilonproteobacteria / Campylobacterales / Helicobacteraceae / Helicobacter. /	1	0
Helicobacter pylori SouthAfrica7 (Helicobacter pylori SAfr7) plasmid unnamed	Bacteria / Proteobacteria / Epsilonproteobacteria / Campylobacterales / Helicobacteraceae / Helicobacter. /	1	0
Helicobacter pylori XZ274 plasmid pXZ274	Bacteria / Proteobacteria / Epsilonproteobacteria / Campylobacterales / Helicobacteraceae / Helicobacter. /	1	0
Lactobacillus salivarius CECT 5713 plasmid pHN1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	3
Lactobacillus salivarius CECT 5713 plasmid pHN2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	1
Lactococcus lactis subsp. lactis CV56 plasmid pCV56C	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-3	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-4	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-6	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	1	0
Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1	Bacteria / Planctomycetes / Phycisphaerae / Phycisphaerales / Phycisphaeraceae / Phycisphaera. /	1	0
Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq203	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Rahnella. /	1	0
Rickettsia australis str. Cutlack plasmid pMC5_1	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	1	0
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 plasmid pCol1B9_SL1344	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella / Salmonella enterica subsp. enterica serovar Typhimurium. /	1	1
Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC4	Bacteria / Firmicutes / Negativicutes / Selenomonadales / Veillonellaceae / Selenomonas. /	1	0
Shigella sonnei plasmid E	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Shigella. /	1	0
Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262	Bacteria / Firmicutes / Clostridia / Thermoanaerobacterales / Thermoanaerobacterales Family III. Incertae Sedis / Thermoanaerobacterium. /	1	1
Thermus sp. CCB_US3_UF1 plasmid pTCCB09	Bacteria / Deinococcus-Thermus / Deinococci / Thermales / Thermaceae / Thermus. /	1	0
Xylella fastidiosa subsp. fastidiosa GB514 plasmid unnamed	Bacteria / Proteobacteria / Gammaproteobacteria / Xanthomonadales / Xanthomonadaceae / Xylella. /	1	0
Yersinia pestis D182038 plasmid pPCP1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	1	0
Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB05	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	1	0
Acetobacter pasteurianus 386B plasmid Apa386Bp3	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus 386B plasmid Apa386Bp4	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acetobacter pasteurianus 386B plasmid Apa386Bp6	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	1	0
Acinetobacter baumannii D1279779 plasmid pD1279779	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Acinetobacter / Acinetobacter calcoaceticus/baumannii complex. /	1	0
Alteromonas macleodii str. Balearic Sea AD45 plasmid pAMBAS45	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Alteromonadaceae / Alteromonas. /	1	0
Anabaena cylindrica PCC 7122 plasmid pANACY.05	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Anabaena. /	1	0
Anabaena cylindrica PCC 7122 plasmid pANACY.06	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Anabaena. /	1	0
Bacillus amyloliquefaciens IT-45 plasmid pBA45-1	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus. /	1	0
Bacillus cereus FRI-35 plasmid p04	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus subtilis subsp. natto BEST195 plasmid pBEST195S	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus. /	1	0
Bacillus thuringiensis Bt407 plasmid BTB_5p	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis Bt407 plasmid BTB_6p	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis Bt407 plasmid BTB_9p	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis HD-789 plasmid p04	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis HD-789 plasmid p06	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT8_1	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-6	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-9	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	1	0
Bacteroides uniformis	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Bacteroidaceae / Bacteroides. /	1	0
Bordetella parapertussis Bpp5 plasmid BPP5P1	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Alcaligenaceae / Bordetella. /	1	0
Candidatus Carsonella ruddii CE isolate Thao2000	Bacteria / Proteobacteria / Gammaproteobacteria / Candidatus Carsonella. /	1	0
Candidatus Carsonella ruddii CS isolate Thao2000	Bacteria / Proteobacteria / Gammaproteobacteria / Candidatus Carsonella. /	1	0
Candidatus Carsonella ruddii DC	Bacteria / Proteobacteria / Gammaproteobacteria / Candidatus Carsonella. /	1	0
Candidatus Carsonella ruddii HC isolate Thao2000	Bacteria / Proteobacteria / Gammaproteobacteria / Candidatus Carsonella. /	1	0
Candidatus Carsonella ruddii HT isolate Thao2000	Bacteria / Proteobacteria / Gammaproteobacteria / Candidatus Carsonella. /	1	0
Candidatus Carsonella ruddii PC isolate NHV	Bacteria / Proteobacteria / Gammaproteobacteria / Candidatus Carsonella. /	1	0
Candidatus Nasuia deltocephalinicola str. NAS-ALF	Bacteria / Proteobacteria / Betaproteobacteria / Candidatus Nasuia. /	1	1
Candidatus Sulcia muelleri str. Sulcia-ALF	Bacteria / Bacteroidetes / Flavobacteriia / Flavobacteriales / Candidatus Sulcia. /	1	0
Chamaesiphon minutus PCC 6605 plasmid pCHA6605.02	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Chamaesiphon. /	1	0
Crinalium epipsammum PCC 9333 plasmid pCRI9333.03	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Crinalium. /	1	0
Cyanobacterium aponinum PCC 10605 plasmid pCYAN10605.01	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Cyanobacterium. /	1	0
Cylindrospermum stagnale PCC 7417 plasmid pCYLST.03	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Cylindrospermum. /	1	0
Emticicia oligotrophica DSM 17448 plasmid pEMTOL05	Bacteria / Bacteroidetes / Cytophagia / Cytophagales / Cytophagaceae / Emticicia. /	1	0
Enterobacter aerogenes EA1509E	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Enterobacter. /	1	0
Enterococcus faecalis D32 plasmid EFD32pB	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	1	0
Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli O104:H4 str. 2009EL-2050 plasmid pG-09EL50	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Escherichia coli O104:H4 str. 2009EL-2071 plasmid pG-09EL71	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Fusobacterium nucleatum subsp. polymorphum ATCC 10953 plasmid pFN3	Bacteria / Fusobacteria / Fusobacteriales / Fusobacteriaceae / Fusobacterium. /	1	0
Gloeocapsa sp. PCC 7428 plasmid pGLO7428.03	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Gloeocapsa. /	1	0
Gloeocapsa sp. PCC 7428 plasmid pGLO7428.04	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Gloeocapsa. /	1	0
Lactobacillus brevis KB290 plasmid pKB290-1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus brevis KB290 plasmid pKB290-2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus brevis KB290 plasmid pKB290-9	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus casei LOCK919 plasmid pLOCK919	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus plantarum 16 plasmid Lp16C	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	1
Lactobacillus plantarum 16 plasmid Lp16L	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp3	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp5	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	1
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp6	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus reuteri I5007 plasmid pLRI04	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lactobacillus reuteri I5007 plasmid pLRI05	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	1	0
Lawsonia intracellularis N343 plasmid 2	Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. /	1	0
Leuconostoc carnosum JB16 plasmid pKLC2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Leuconostoc. /	1	0
Leuconostoc carnosum JB16 plasmid pKLC3	Bacteria / Firmicutes / Bacilli / Lactobacillales / Leuconostoc. /	1	0
Microcoleus sp. PCC 7113 plasmid pMIC7113.06	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Microcoleus. /	1	0
Microcoleus sp. PCC 7113 plasmid pMIC7113.07	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Microcoleus. /	1	0
Microcoleus sp. PCC 7113 plasmid pMIC7113.08	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Microcoleus. /	1	0
Oscillatoria acuminata PCC 6304 plasmid pOSCIL6304.01	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Oscillatoria. /	1	0
Propionibacterium acnes HL096PA1 plasmid unnamed	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Propionibacterineae / Propionibacteriaceae / Propionibacterium. /	1	0
Pseudomonas stutzeri RCH2 plasmid pPSEST01	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Pseudomonadaceae / Pseudomonas. /	1	0
Pseudomonas stutzeri RCH2 plasmid pPSEST02	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Pseudomonadaceae / Pseudomonas. /	1	0
Ralstonia solanacearum PSI07 plasmid pRSI13	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Ralstonia. /	1	0
Rivularia sp. PCC 7116 plasmid pRIV7116.01	Bacteria / Cyanobacteria / Nostocales / Rivulariaceae / Rivularia. /	1	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	1
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	1	0
Serratia plymuthica 4Rx13 plasmid p75	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Serratia. /	1	1
Sinorhizobium fredii USDA 257 plasmid pUSDA257	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Rhizobiaceae / Sinorhizobium/Ensifer group / Sinorhizobium. /	1	0
Sinorhizobium fredii USDA 257 plasmid pUSDA257	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Rhizobiaceae / Sinorhizobium/Ensifer group / Sinorhizobium. /	1	0
Sinorhizobium fredii USDA 257 plasmid pUSDA257	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Rhizobiaceae / Sinorhizobium/Ensifer group / Sinorhizobium. /	1	0
Solibacillus silvestris StLB046 plasmid pSSIL1	Bacteria / Firmicutes / Bacilli / Bacillales / Planococcaceae / Solibacillus. /	1	0
Staphylococcus aureus subsp. aureus CN1 plasmid unnamed	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	1	0
Staphylococcus aureus subsp. aureus CN1 plasmid unnamed	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	1	0
Staphylococcus warneri SG1 plasmid unnamed	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	1	0
Synechococcus sp. PCC 7502 plasmid pSYN7502.02	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Synechococcus. /	1	0
Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01	Bacteria / Firmicutes / Clostridia / Thermoanaerobacterales / Thermoanaerobacterales Family III. Incertae Sedis / Thermoanaerobacterium. /	1	0
Xanthomonas citri subsp. citri Aw12879 plasmid pXcaw19	Bacteria / Proteobacteria / Gammaproteobacteria / Xanthomonadales / Xanthomonadaceae / Xanthomonas. /	1	0
Zymomonas mobilis subsp. mobilis ATCC 29191 plasmid pZZ6.03	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	1	0
Bacillus amyloliquefaciens subsp. plantarum NAU-B3 plasmid pBamNAU-B3a	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus. /	1	0
Campylobacter coli CVM N29710 plasmid pN29710-1	Bacteria / Proteobacteria / Epsilonproteobacteria / Campylobacterales / Campylobacteraceae / Campylobacter. /	1	0
Campylobacter jejuni subsp. jejuni 00-2544 plasmid unnamed	Bacteria / Proteobacteria / Epsilonproteobacteria / Campylobacterales / Campylobacteraceae / Campylobacter. /	1	0
Candidatus Tremblaya phenacola PAVE	Bacteria / Proteobacteria / Betaproteobacteria / Candidatus Tremblaya. /	1	0
Enterococcus mundtii QU 25 plasmid pQY024	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	1	0
Enterococcus mundtii QU 25 plasmid pQY082	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	1	0
Escherichia coli JJ1886 plasmid pJJ1886_1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	1	0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. /	1	0
Pseudomonas fluorescens R124 plasmid pMP-R124	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Pseudomonadaceae / Pseudomonas. /	1	1
Shigella dysenteriae 1617 plasmid pSLG231	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Shigella. /	1	0
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	1	0
Acidiphilium cryptum JF-5 plasmid pACRY05	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acidiphilium. /	2	0
Acidiphilium multivorum AIU301 plasmid pACMV3	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acidiphilium. /	2	0
Acidithiobacillus caldus SM-1 plasmid pLAtc2	Bacteria / Proteobacteria / Gammaproteobacteria / Acidithiobacillales / Acidithiobacillaceae / Acidithiobacillus. /	2	0
Acidovorax sp. JS42 plasmid pAOVO02	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Acidovorax. /	2	0
Acinetobacter baumannii ACICU plasmid pACICU1	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Acinetobacter / Acinetobacter calcoaceticus/baumannii complex. /	2	0
Acinetobacter baumannii ACICU plasmid pACICU2	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Acinetobacter / Acinetobacter calcoaceticus/baumannii complex. /	2	0
Aggregatibacter phage S1249	Bacteria / Proteobacteria / Gammaproteobacteria / Pasteurellales / Pasteurellaceae / Aggregatibacter. /	2	0
Aliivibrio salmonicida LFI1238 plasmid pVSAL320	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. /	2	0
Anabaena variabilis ATCC 29413 (Anabaena flos-aquae UTEX 1444) plasmid B	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Anabaena. /	2	0
Arthrobacter arilaitensis Re117 plasmid pRE117-1	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Micrococcineae / Micrococcaceae / Arthrobacter. /	2	0
Bacillus cereus ATCC 14579 plasmid pBClin15	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Bacillus thuringiensis serovar konkukian str. 97-27 plasmid pBT9727	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Bacteroides fragilis NCTC 9343 plasmid pBF9343	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Bacteroidaceae / Bacteroides. /	2	0
Bacteroides thetaiotaomicron VPI-5482 plasmid p5482	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Bacteroidaceae / Bacteroides. /	2	0
Beijerinckia indica subsp. indica ATCC 9039 plasmid pBIND02	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Beijerinckiaceae / Beijerinckia. /	2	0
Burkholderia ambifaria AMMD plasmid 1	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Burkholderia / Burkholderia cepacia complex. /	2	0
Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01	Bacteria / Firmicutes / Clostridia / Thermoanaerobacterales / Thermoanaerobacterales Family III. Incertae Sedis / Caldicellulosiruptor. /	2	0
Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01	Bacteria / Deferribacteres / Deferribacterales / Deferribacteraceae. /	2	0
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG3	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Candidatus Azobacteroides. /	2	0
Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Micrococcineae / Microbacteriaceae / Clavibacter. /	2	1
Clostridium botulinum BKT015925 plasmid p4BKT015925	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiaceae / Clostridium. /	2	1
Clostridium botulinum BKT015925 plasmid p5BKT015925	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiaceae / Clostridium. /	2	0
Coxiella burnetii CbuK_Q154 plasmid pQpRS_K_Q154	Bacteria / Proteobacteria / Gammaproteobacteria / Legionellales / Coxiellaceae / Coxiella. /	2	2
Coxiella burnetii Dugway 5J108-111 plasmid pQpDG	Bacteria / Proteobacteria / Gammaproteobacteria / Legionellales / Coxiellaceae / Coxiella. /	2	2
Coxiella burnetii RSA 331 plasmid QpH1	Bacteria / Proteobacteria / Gammaproteobacteria / Legionellales / Coxiellaceae / Coxiella. /	2	1
Coxiella burnetii RSA 493 plasmid pQpH1	Bacteria / Proteobacteria / Gammaproteobacteria / Legionellales / Coxiellaceae / Coxiella. /	2	1
Cronobacter sakazakii ATCC BAA-894 plasmid pESA2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Cronobacter. /	2	0
Cyanothece sp. ATCC 51142 plasmid B	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	2	0
Cyanothece sp. PCC 7822 plasmid Cy782204	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	2	0
Cyanothece sp. PCC 8802 plasmid pP880203	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	2	0
Deinococcus radiodurans R1 plasmid CP1	Bacteria / Deinococcus-Thermus / Deinococci / Deinococcales / Deinococcaceae / Deinococcus. /	2	1
Enterococcus faecalis V583 plasmid pTEF2	Bacteria / Firmicutes / Lactobacillales / Enterococcaceae / Enterococcus. /	2	0
Erwinia tasmaniensis Et1/99 plasmid pET35	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	2	0
Escherichia coli O111:H- str. 11128 plasmid pO111_3	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli O157:H7 str. EC4115 plasmid pO157	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli UMN026 plasmid p2ESCUM	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli UTI89 plasmid pUTI89	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	1
Geobacillus sp. Y412MC52 plasmid pGYMC5201	Bacteria / Firmicutes / Bacillales / Bacillaceae / Geobacillus. /	2	0
Geobacillus sp. Y412MC61 plasmid pGYMC6101	Bacteria / Firmicutes / Bacillales / Bacillaceae / Geobacillus. /	2	0
Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIA01	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Gluconacetobacter. /	2	0
Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIPal5I	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Gluconacetobacter. /	2	0
Gluconobacter oxydans 621H plasmid pGOX3	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Gluconobacter. /	2	1
Gordonia bronchialis DSM 43247 plasmid pGBRO01	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Gordoniaceae / Gordonia. /	2	0
Granulicella tundricola plasmid pACIX904	Bacteria / Acidobacteria / Acidobacteriales / Acidobacteriaceae / Granulicella. /	2	1
Helicobacter bizzozeronii CIII-1 plasmid phbz1	Bacteria / Proteobacteria / Epsilonproteobacteria / Campylobacterales / Helicobacteraceae / Helicobacter. /	2	0
Herpetosiphon aurantiacus DSM 785 plasmid pHAU02	Bacteria / Chloroflexi / Herpetosiphonales / Herpetosiphonaceae / Herpetosiphon. /	2	0
Jannaschia sp. CCS1 plasmid plasmid1	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Jannaschia. /	2	0
Kineococcus radiotolerans SRS30216 plasmid pKRAD02	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Kineosporiineae / Kineosporiaceae / Kineococcus. /	2	0
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	1
Lactobacillus buchneri NRRL B-30929 plasmid pLBUC02	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus casei ATCC 334 plasmid 1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus casei str. Zhang plasmid plca36	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus reuteri SD2112 plasmid pLR584	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus reuteri SD2112 plasmid pLR585	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus salivarius UCC118 plasmid pSF118-20	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactococcus lactis subsp. cremoris SK11 plasmid 2	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	2	0
Lawsonia intracellularis PHE/MN1-00 plasmid 3	Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. /	2	0
Leuconostoc citreum KM20 plasmid pLCK4	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	2	0
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4701	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	2	0
Leuconostoc kimchii IMSNU 11154 plasmid LkipL4704	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	2	0
Methylobacterium extorquens DM4 (Methylobacterium plasmid p2METDI	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	2	0
Methylobacterium nodulans ORS 2060 plasmid pMNOD03	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	2	2
Methylobacterium nodulans ORS 2060 plasmid pMNOD05	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	2	0
Methylobacterium nodulans ORS 2060 plasmid pMNOD06	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	2	0
Methylobacterium radiotolerans JCM 2831 plasmid pMRAD06	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	2	0
Methylobacterium radiotolerans JCM 2831 plasmid pMRAD07	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	2	0
Methylobacterium radiotolerans JCM 2831 plasmid pMRAD08	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	2	0
Mycobacterium ulcerans Agy99 plasmid pMUM001	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Mycobacterium. /	2	0
Natranaerobius thermophilus JW/NM-WN-LF plasmid pNTHE02	Bacteria / Firmicutes / Clostridia / Natranaerobiales / Natranaerobiaceae / Natranaerobius. /	2	0
Nitrosospira multiformis ATCC 25196 plasmid 1	Bacteria / Proteobacteria / Betaproteobacteria / Nitrosomonadales / Nitrosomonadaceae / Nitrosospira. /	2	0
Nostoc punctiforme PCC 73102 (Nostoc punctiforme ATCC 29133) plasmid pNPUN04	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Nostoc. /	2	0
Nostoc sp. PCC 7120 (Anabaena sp. PCC7120) plasmid pCC7120gamma	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Nostoc. /	2	0
Polaromonas naphthalenivorans CJ2 plasmid pPNAP05	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Polaromonas. /	2	0
Polaromonas naphthalenivorans CJ2 plasmid pPNAP07	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Polaromonas. /	2	0
Prosthecochloris aestuarii DSM 271 plasmid pPAES01	Bacteria / Chlorobi / Chlorobia / Chlorobiales / Chlorobiaceae / Prosthecochloris. /	2	0
Pseudonocardia dioxanivorans CB1190 plasmid pPSED02	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Pseudonocardineae / Pseudonocardiaceae / Pseudonocardia. /	2	0
Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201	Bacteria / Bacteroidetes / Bacteroidetes Order II. Incertae sedis / Rhodothermaceae / Rhodothermus. /	2	3
Rickettsia africae ESF-5 plasmid pRAF	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	2	0
Runella slithyformis DSM 19594 plasmid pRUNSL03	Bacteria / Bacteroidetes / Cytophagia / Cytophagales / Cytophagaceae / Runella. /	2	0
Runella slithyformis DSM 19594 plasmid pRUNSL04	Bacteria / Bacteroidetes / Cytophagia / Cytophagales / Cytophagaceae / Runella. /	2	2
Salinibacter ruber M8 plasmid pSR61	Bacteria / Bacteroidetes / Bacteroidetes Order II. Incertae sedis / Rhodothermaceae / Salinibacter. /	2	0
Salmonella enterica subsp. enterica serovar Choleraesuis str. plasmid pSCV50	SC-B67 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella / Salmonella enterica subsp. enterica serovar Choleraesuis. /	2	0
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 plasmid pSL476_91	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella / Salmonella enterica subsp. enterica serovar Heidelberg. /	2	0
Shewanella baltica OS195 plasmid pS19502	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Shewanellaceae / Shewanella. /	2	0
Shewanella baltica OS223 plasmid pS22301	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Shewanellaceae / Shewanella. /	2	0
Shigella boydii CDC 3083-94 plasmid pBS512_33	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Shigella. /	2	1
Sodalis glossinidius str. morsitans plasmid pSG2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Sodalis. /	2	1
Sphingobium japonicum UT26S plasmid pUT1	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Sphingobium. /	2	0
Sphingopyxis alaskensis RB2256 plasmid F plasmid	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Sphingopyxis. /	2	0
Streptococcus suis BM407 plasmid pBM407	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Streptococcus. /	2	1
Synechococcus sp. PCC 7002 plasmid pAQ4	Bacteria / Cyanobacteria / Chroococcales / Synechococcus. /	2	0
Synechocystis sp. PCC 6803 (Synechocystis PCC 6803) plasmid pSYSX	Bacteria / Cyanobacteria / Chroococcales / Synechocystis. /	2	0
Thermovibrio ammonificans HB-1 plasmid pTHEAM01	Bacteria / Aquificae / Aquificales / Desulfurobacteriaceae / Thermovibrio. /	2	0
Thermus thermophilus HB8 plasmid pTT8	Bacteria / Deinococcus-Thermus / Deinococci / Thermales / Thermaceae / Thermus. /	2	0
Vibrio vulnificus YJ016 plasmid pYJ016	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. /	2	1
Waddlia chondrophila WSU 86-1044 plasmid pWc	Bacteria / Chlamydiae / Chlamydiales / Waddliaceae / Waddlia. /	2	0
Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV19	Bacteria / Proteobacteria / Gammaproteobacteria / Xanthomonadales / Xanthomonadaceae / Xanthomonas. /	2	0
Yersinia enterocolitica subsp. enterocolitica 8081 plasmid pYVe8081	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	1
Yersinia pestis Antiqua plasmid pPCP	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	0
Yersinia pestis biovar Microtus str. 91001 plasmid pCRY	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	1
Yersinia pestis biovar Microtus str. 91001 plasmid pPCP1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	0
Yersinia pestis CO92 plasmid pPCP1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	0
Yersinia pestis Nepal516 plasmid pPCP	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	0
Yersinia pseudotuberculosis IP 31758 plasmid plasmid_153kb	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	2
Zymomonas mobilis subsp. mobilis NCIMB 11163 plasmid pZA1002	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	2	0
Bacillus megaterium WSH-002 plasmid WSH-002_p1	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus. /	2	0
Bacillus megaterium WSH-002 plasmid WSH-002_p2	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus. /	2	0
Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT8252	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Candidatus Rickettsia amblyommii str. GAT-30V plasmid pMCE_2	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	2	0
Deinococcus gobiensis I-0 plasmid P6	Bacteria / Deinococcus-Thermus / Deinococci / Deinococcales / Deinococcaceae / Deinococcus. /	2	2
Desulfosporosinus acidiphilus SJ4 plasmid pDESACI.01	Bacteria / Firmicutes / Clostridia / Clostridiales / Peptococcaceae / Desulfosporosinus. /	2	0
Enterococcus faecium DO plasmid 1	Bacteria / Firmicutes / Lactobacillales / Enterococcaceae / Enterococcus. /	2	0
Escherichia coli KO11FL plasmid pEKO1101	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli O55:H7 str. RM12579 plasmid p12579_3	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli UM146 plasmid pUM146	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli W plasmid pRK1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli W plasmid pRK1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Klebsiella. /	2	0
Lactobacillus casei BD-II plasmid pBD-II	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	2
Lactococcus lactis subsp. cremoris A76 plasmid pQA549	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	2	2
Lactococcus lactis subsp. lactis CV56 plasmid pCV56A	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	2	0
Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	2	0
Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	2	0
Methylophaga sp. JAM7 plasmid unnamed	Bacteria / Proteobacteria / Gammaproteobacteria / Thiotrichales / Piscirickettsiaceae / Methylophaga. /	2	0
Neisseria gonorrhoeae TCDC-NG08107 plasmid pNGTCDC08107	Bacteria / Proteobacteria / Betaproteobacteria / Neisseriales / Neisseriaceae / Neisseria. /	2	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-8	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	2	0
Rickettsia rhipicephali str. 3-7-female6-CWPP plasmid pMCC_1	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	2	0
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella / Salmonella enterica subsp. enterica serovar Heidelberg. /	2	0
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 plasmid TY474p2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella / Salmonella enterica subsp. enterica serovar Typhimurium. /	2	0
Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC3	Bacteria / Firmicutes / Negativicutes / Selenomonadales / Veillonellaceae / Selenomonas. /	2	0
Shewanella baltica OS678 plasmid pSBAL67801	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Shewanellaceae / Shewanella. /	2	0
Sinorhizobium fredii HH103 plasmid pSfHH103a	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Rhizobiaceae / Sinorhizobium/Ensifer group / Sinorhizobium. /	2	0
Turneriella parva DSM 21527 plasmid pTURPA.01	Bacteria / Spirochaetes / Spirochaetales / Leptospiraceae / Turneriella. /	2	0
Yersinia pestis A1122 plasmid unnamed	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	0
Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	1
Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pPCP	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	0
Yersinia pestis D106004 plasmid pPCY1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	2	0
Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB01	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	2	0
Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB02	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	2	0
Acetobacter pasteurianus 386B plasmid Apa386Bp5	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acetobacter. /	2	0
Anabaena sp. 90 plasmid pANA01	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Anabaena. /	2	0
Bacillus cereus FRI-35 plasmid p03	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Bacillus thuringiensis Bt407 plasmid BTB_7p	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Bacillus thuringiensis HD-789 plasmid p05	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-39	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-8	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Candidatus Portiera aleyrodidarum BT-B-HRs	Bacteria / Proteobacteria / Gammaproteobacteria / Oceanospirillales / Halomonadaceae / Zymobacter group / whitefly endosymbionts / Candidatus Portiera. /	2	0
Candidatus Portiera aleyrodidarum BT-B-HRs	Bacteria / Proteobacteria / Gammaproteobacteria / Oceanospirillales / Halomonadaceae / Zymobacter group / whitefly endosymbionts / Candidatus Portiera. /	2	0
Candidatus Portiera aleyrodidarum BT-QVLC	Bacteria / Proteobacteria / Gammaproteobacteria / Oceanospirillales / Halomonadaceae / Zymobacter group / whitefly endosymbionts / Candidatus Portiera. /	2	0
Candidatus Portiera aleyrodidarum BT-QVLC	Bacteria / Proteobacteria / Gammaproteobacteria / Oceanospirillales / Halomonadaceae / Zymobacter group / whitefly endosymbionts / Candidatus Portiera. /	2	0
Candidatus Portiera aleyrodidarum TV	Bacteria / Proteobacteria / Gammaproteobacteria / Oceanospirillales / Halomonadaceae / Zymobacter group / whitefly endosymbionts / Candidatus Portiera. /	2	1
Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiaceae / Clostridium. /	2	0
Crinalium epipsammum PCC 9333 plasmid pCRI9333.05	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Crinalium. /	2	0
Enterococcus faecalis D32 plasmid EFD32pA	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	2	1
Enterococcus faecium Aus0004 plasmid AUS0004_p1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	2	0
Enterococcus faecium Aus0085 plasmid p4	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	2	0
Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	2	0
Lactobacillus brevis KB290 plasmid pKB290-4	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus brevis KB290 plasmid pKB290-5	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus casei W56 plasmid pW56	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	2
Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus plantarum 16 plasmid Lp16E	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	1
Lactobacillus plantarum 16 plasmid Lp16I	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	2
Lactobacillus plantarum ZJ316 plasmid pLP-ZJ101	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactobacillus reuteri I5007 plasmid pLRI03	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	2	0
Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS5	Bacteria / Firmicutes / Bacilli / Lactobacillales / Streptococcaceae / Lactococcus. /	2	0
Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS6	Bacteria / Firmicutes / Bacilli / Lactobacillales / Streptococcaceae / Lactococcus. /	2	0
Lawsonia intracellularis N343 plasmid 3	Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Lawsonia. /	2	0
Leuconostoc carnosum JB16 plasmid pKLC4	Bacteria / Firmicutes / Bacilli / Lactobacillales / Leuconostoc. /	2	0
Microcoleus sp. PCC 7113 plasmid pMIC7113.01	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Microcoleus. /	2	0
Microcoleus sp. PCC 7113 plasmid pMIC7113.03	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Microcoleus. /	2	0
Microcoleus sp. PCC 7113 plasmid pMIC7113.05	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Microcoleus. /	2	0
Nostoc sp. PCC 7524 (Nostoc sp. ATCC 29411) plasmid pNOS7524.01	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Nostoc. /	2	0
Oscillatoria acuminata PCC 6304 plasmid pOSCIL6304.02	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Oscillatoria. /	2	0
Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.03	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Oscillatoria. /	2	0
Phaeobacter gallaeciensis 2.10 plasmid pPGA2_71	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. /	2	0
Phaeobacter gallaeciensis DSM 17395 = CIP 105210 plasmid pPGA1_65	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. /	2	0
Psychrobacter sp. G plasmid PsyG_26	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Psychrobacter. /	2	0
Salmonella enterica subsp. enterica serovar Bareilly str. plasmid unnamed	CFSAN000189 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	2	2
Salmonella enterica subsp. enterica serovar Heidelberg str. plasmid pCFSAN002069_02	CFSAN002069 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	2	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	2	1
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	2	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	2	0
Salmonella enterica subsp. enterica serovar Weltevreden str. plasmid pSW82	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	2	0
Serratia liquefaciens ATCC 27592 plasmid unnamed	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Serratia. /	2	0
Singulisphaera acidiphila DSM 18658 plasmid pSINAC03	Bacteria / Planctomycetes / Planctomycetia / Planctomycetales / Planctomycetaceae / Singulisphaera. /	2	0
Sinorhizobium fredii USDA 257 plasmid pUSDA257	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Rhizobiaceae / Sinorhizobium/Ensifer group / Sinorhizobium. /	2	0
Sphingomonas sp. MM-1 plasmid pISP2	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Sphingomonas. /	2	0
Sphingomonas sp. MM-1 plasmid pISP4	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Sphingomonas. /	2	0
Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	2	1
Staphylococcus warneri SG1 plasmid unnamed	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	2	0
Staphylococcus warneri SG1 plasmid unnamed	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	2	0
Synechocystis sp. PCC 6803 plasmid pSYSX_M	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Synechocystis. /	2	0
Thermus oshimai JL-2 plasmid pTHEOS02	Bacteria / Deinococcus-Thermus / Deinococci / Thermales / Thermaceae / Thermus. /	2	0
Thioflavicoccus mobilis 8321 plasmid pTHIMO01	Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Chromatiaceae / Thioflavicoccus. /	2	0
Xanthomonas axonopodis Xac29-1 plasmid pXAC47	Bacteria / Proteobacteria / Gammaproteobacteria / Xanthomonadales / Xanthomonadaceae / Xanthomonas. /	2	1
Bacillus thuringiensis YBT-1518 plasmid pBMB0228	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Bacillus toyonensis BCT-7112 plasmid pBCT8	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	2	0
Carnobacterium sp. WN1359 plasmid pWNCR12	Bacteria / Firmicutes / Bacilli / Lactobacillales / Carnobacteriaceae / Carnobacterium. /	2	0
Carnobacterium sp. WN1359 plasmid pWNCR15	Bacteria / Firmicutes / Bacilli / Lactobacillales / Carnobacteriaceae / Carnobacterium. /	2	0
Desulfovibrio gigas DSM 1382 = ATCC 19364 plasmid unnamed	Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. /	2	0
Enterococcus mundtii QU 25 plasmid pQY039	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	2	0
Phaeobacter gallaeciensis DSM 26640 plasmid pGal_F69	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Phaeobacter. /	2	0
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	2	0
Acidiphilium multivorum AIU301 plasmid pACMV4	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acidiphilium. /	3	0
Acidiphilium multivorum AIU301 plasmid pACMV5	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acidiphilium. /	3	0
Acidovorax sp. JS42 plasmid pAOVO01	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Acidovorax. /	3	0
Acinetobacter baumannii ATCC 17978 plasmid pAB1	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Acinetobacter / Acinetobacter calcoaceticus/baumannii complex. /	3	0
Alicycliphilus denitrificans K601 plasmid pALIDE201	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Alicycliphilus. /	3	0
Aliivibrio salmonicida LFI1238 plasmid pVSAL840	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. /	3	0
Anabaena variabilis ATCC 29413 (Anabaena flos-aquae UTEX 1444)	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Anabaena. /	3	0
Azospirillum lipoferum 4B plasmid AZO_p6	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Rhodospirillaceae / Azospirillum. /	3	0
Bacillus cereus E33L plasmid pE33L9	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Bacillus megaterium QM B1551 plasmid pBM100	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus. /	3	0
Bacillus megaterium QM B1551 plasmid pBM400	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus. /	3	0
Bacillus weihenstephanensis KBAB4 plasmid pBWB402	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Bacillus weihenstephanensis KBAB4 plasmid pBWB403	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Bacteroides fragilis YCH46 plasmid pBFY46	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Bacteroidaceae / Bacteroides. /	3	0
Bacteroides salanitronis DSM 18170 plasmid pBACSA02	Bacteria / Bacteroidetes / Bacteroidia / Bacteroidales / Bacteroidaceae / Bacteroides. /	3	0
Bartonella tribocorum CIP 105476 plasmid pBT01	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Bartonellaceae / Bartonella. /	3	0
Burkholderia cenocepacia J2315 plasmid pBCJ2315	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Burkholderia / Burkholderia cepacia complex. /	3	0
Burkholderia gladioli BSR3 plasmid bgla_2p	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Burkholderia. /	3	0
Candidatus Riesia pediculicola USDA	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Candidatus Riesia. /	3	0
Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM1	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Micrococcineae / Microbacteriaceae / Clavibacter. /	3	0
Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Micrococcineae / Microbacteriaceae / Clavibacter. /	3	0
Clostridium botulinum B1 str. Okra plasmid pCLD	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiaceae / Clostridium. /	3	0
Clostridium botulinum F str. Langeland plasmid pCLI	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiaceae / Clostridium. /	3	0
Clostridium kluyveri NBRC 12016 plasmid pCKL1	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiaceae / Clostridium. /	3	1
Corynebacterium aurimucosum ATCC 700975 plasmid pET44827	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Corynebacteriaceae / Corynebacterium. /	3	0
Cyanothece sp. PCC 7424 plasmid pP742403	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	3	0
Cyanothece sp. PCC 7822 plasmid Cy782205	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	3	0
Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Enterobacter / Enterobacter cloacae complex. /	3	0
Enterococcus faecalis V583 plasmid pTEF1	Bacteria / Firmicutes / Lactobacillales / Enterococcaceae / Enterococcus. /	3	0
Erwinia amylovora CFBP1430 plasmid pEA29	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	3	1
Erwinia tasmaniensis Et1/99 plasmid pET45	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	3	0
Escherichia coli E24377A plasmid pETEC_73	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	2
Escherichia coli O157:H7 str. EDL933 plasmid pO157	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Escherichia coli O157:H7 str. Sakai plasmid pO157	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Escherichia coli O157:H7 str. TW14359 plasmid pO157	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Escherichia coli S88 plasmid pECOS88	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	1
Escherichia coli SE11 plasmid pSE11-1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	1
Escherichia coli SE11 plasmid pSE11-3	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	2
Finegoldia magna ATCC 29328 plasmid pFMC	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiales Family XI. Incertae Sedis / Finegoldia. /	3	0
Gluconobacter oxydans 621H plasmid pGOX2	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Gluconobacter. /	3	1
Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02	Bacteria / Bacteroidetes / Sphingobacteriia / Sphingobacteriales / Saprospiraceae / Haliscomenobacter. /	3	0
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN7	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Klebsiella. /	3	0
Lactobacillus brevis ATCC 367 plasmid 1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus brevis ATCC 367 plasmid 2	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	2
Lactobacillus reuteri SD2112 plasmid pLR581	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus rhamnosus Lc 705 plasmid pLC1	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Legionella pneumophila str. Lens plasmid pLPL	Bacteria / Proteobacteria / Gammaproteobacteria / Legionellales / Legionellaceae / Legionella. /	3	0
Leuconostoc citreum KM20 plasmid pLCK1	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	3	0
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 plasmid pLEUM1	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	3	0
Methylobacterium chloromethanicum CM4 plasmid pMCHL02	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	3	0
Methylobacterium extorquens AM1 plasmid p1META1	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	3	1
Methylobacterium nodulans ORS 2060 plasmid pMNOD04	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	3	0
Methylobacterium populi BJ001 plasmid pMPOP01	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	3	0
Methylobacterium populi BJ001 plasmid pMPOP02	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	3	0
Methylobacterium radiotolerans JCM 2831 plasmid pMRAD05	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	3	0
Methylobacterium sp. 4-46 plasmid pM44602	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	3	0
Methylovorus glucosetrophus SIP3-4 plasmid pMsip01	Bacteria / Proteobacteria / Betaproteobacteria / Methylophilales / Methylophilaceae / Methylovorus. /	3	0
Mycobacterium abscessus ATCC 19977 plasmid	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Mycobacterium / Mycobacterium abscessus. /	3	0
Mycobacterium gilvum PYR-GCK plasmid pMFLV02	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Mycobacterium. /	3	0
Mycobacterium gilvum PYR-GCK plasmid pMFLV03	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Mycobacterium. /	3	0
Mycobacterium marinum M plasmid pMM23	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Mycobacterium. /	3	0
Mycobacterium sp. Spyr1 plasmid pMSPYR102	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Mycobacterium. /	3	0
Natranaerobius thermophilus JW/NM-WN-LF plasmid pNTHE01	Bacteria / Firmicutes / Clostridia / Natranaerobiales / Natranaerobiaceae / Natranaerobius. /	3	0
Nitrosococcus oceani ATCC 19707 plasmid A	Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Chromatiaceae / Nitrosococcus. /	3	0
Nitrosococcus watsonii C-113 plasmid pNWAT01	Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Chromatiaceae / Nitrosococcus. /	3	0
Nitrosospira multiformis ATCC 25196 plasmid 3	Bacteria / Proteobacteria / Betaproteobacteria / Nitrosomonadales / Nitrosomonadaceae / Nitrosospira. /	3	0
Nostoc sp. PCC 7120 (Anabaena sp. PCC7120) plasmid pCC7120delta	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Nostoc. /	3	0
Ochrobactrum anthropi ATCC 49188 plasmid pOANT04	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Brucellaceae / Ochrobactrum. /	3	0
Polaromonas naphthalenivorans CJ2 plasmid pPNAP02	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Polaromonas. /	3	0
Pusillimonas sp. T7-7 plasmid unnamed	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Alcaligenaceae / Pusillimonas. /	3	0
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA04	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Rhodobacter. /	3	0
Rhodoferax ferrireducens T118 plasmid plasmid1	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Comamonadaceae / Albidiferax. /	3	0
Rickettsia massiliae MTU5 plasmid pRMA	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	3	0
Ruminococcus albus 7 plasmid pRUMAL03	Bacteria / Firmicutes / Clostridia / Clostridiales / Ruminococcaceae / Ruminococcus. /	3	0
Salinibacter ruber M8 plasmid pSR56	Bacteria / Bacteroidetes / Bacteroidetes Order II. Incertae sedis / Rhodothermaceae / Salinibacter. /	3	0
Salinibacter ruber M8 plasmid pSR84	Bacteria / Bacteroidetes / Bacteroidetes Order II. Incertae sedis / Rhodothermaceae / Salinibacter. /	3	1
Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid unnamed	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella / Salmonella enterica subsp. enterica serovar Agona. /	3	0
Sebaldella termitidis ATCC 33386 plasmid pSTERM01	Bacteria / Fusobacteria / Fusobacteriales / Leptotrichiaceae / Sebaldella. /	3	0
Shewanella baltica OS223 plasmid pS22303	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Shewanellaceae / Shewanella. /	3	0
Shigella boydii CDC 3083-94 plasmid pBS512_211	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Shigella. /	3	5
Sodalis glossinidius str. morsitans plasmid pSG1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Sodalis. /	3	2
Spirosoma linguale DSM 74 plasmid pSLIN03	Bacteria / Bacteroidetes / Cytophagia / Cytophagales / Cytophagaceae / Spirosoma. /	3	0
Staphylococcus aureus subsp. aureus ED98 plasmid pAVX	Bacteria / Firmicutes / Bacillales / Staphylococcus. /	3	0
Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp	Bacteria / Firmicutes / Bacillales / Staphylococcus. /	3	0
Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03	Bacteria / Firmicutes / Bacillales / Staphylococcus. /	3	0
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 plasmid pSSP2	Bacteria / Firmicutes / Bacillales / Staphylococcus. /	3	0
Streptomyces coelicolor A3(2) plasmid SCP2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Streptomycineae / Streptomycetaceae / Streptomyces. /	3	0
Streptosporangium roseum DSM 43021 plasmid pSROS01	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Streptosporangineae / Streptosporangiaceae / Streptosporangium. /	3	0
Synechococcus elongatus PCC 7942 plasmid 1	Bacteria / Cyanobacteria / Chroococcales / Synechococcus. /	3	0
Synechocystis sp. PCC 6803 (Synechocystis PCC6803) plasmid pSYSA	Bacteria / Cyanobacteria / Chroococcales / Synechocystis. /	3	0
Synechocystis sp. PCC 6803 (Synechocystis PCC6803) plasmid pSYSG	Bacteria / Cyanobacteria / Chroococcales / Synechocystis. /	3	0
Thiomonas intermedia K12 plasmid pTINT02	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Thiomonas. /	3	0
Vibrio fischeri MJ11 plasmid pMJ100	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. /	3	0
Vibrio harveyi ATCC BAA-1116 plasmid pVIBHAR	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. /	3	0
Xylella fastidiosa 9a5c plasmid pXF51	Bacteria / Proteobacteria / Gammaproteobacteria / Xanthomonadales / Xanthomonadaceae / Xylella. /	3	1
Xylella fastidiosa M23 plasmid pXFAS01	Bacteria / Proteobacteria / Gammaproteobacteria / Xanthomonadales / Xanthomonadaceae / Xylella. /	3	0
Yersinia pestis Angola plasmid new_pCD	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	3	0
Yersinia pestis Z176003 plasmid pCD1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	3	0
Yersinia pseudotuberculosis IP 31758 plasmid plasmid_59kb	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	3	0
Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	3	0
Zymomonas mobilis subsp. pomaceae ATCC 29192 plasmid pZYMOP01	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	3	0
Zymomonas mobilis subsp. pomaceae ATCC 29192 plasmid pZYMOP02	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	3	0
Acinetobacter baumannii MDR-TJ plasmid pABTJ1	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Acinetobacter / Acinetobacter calcoaceticus/baumannii complex. /	3	0
Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT72	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Candidatus Rickettsia amblyommii str. GAT-30V plasmid pMCE_1	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	3	0
Clostridium botulinum F str. 230613 plasmid pCBF	Bacteria / Firmicutes / Clostridia / Clostridiales / Clostridiaceae / Clostridium. /	3	0
Deinococcus gobiensis I-0 plasmid P4	Bacteria / Deinococcus-Thermus / Deinococci / Deinococcales / Deinococcaceae / Deinococcus. /	3	0
Edwardsiella tarda FL6-60 plasmid pFL6-60	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Edwardsiella. /	3	1
Escherichia coli ETEC H10407 plasmid p666	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Escherichia coli O55:H7 str. RM12579 plasmid p12579_1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Escherichia coli UMNK88 plasmid pUMNK88_K88	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	2
Escherichia coli Xuzhou21 plasmid pO157	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Escherichia coli Xuzhou21 plasmid pO157_Sal	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Lactobacillus casei LC2W plasmid pLC2W	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	2
Lactobacillus helveticus H10 plasmid pH10	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactococcus lactis subsp. cremoris A76 plasmid pQA554	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	3	0
Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE04	Bacteria / Firmicutes / Lactobacillales / Leuconostoc. /	3	0
Marinobacter adhaerens HP15 plasmid pHP-42	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Alteromonadaceae / Marinobacter. /	3	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-5	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	3	0
Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Pediococcus. /	3	0
Rickettsia massiliae str. AZT80 plasmid pRMB	Bacteria / Proteobacteria / Alphaproteobacteria / Rickettsiales / Rickettsiaceae / Rickettsieae / Rickettsia / spotted fever group. /	3	0
Shewanella baltica BA175 plasmid pSBAL17502	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Shewanellaceae / Shewanella. /	3	0
Shewanella baltica OS117 plasmid pSBAL11701	Bacteria / Proteobacteria / Gammaproteobacteria / Alteromonadales / Shewanellaceae / Shewanella. /	3	0
Sinorhizobium fredii HH103 plasmid pSfHH103b	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Rhizobiaceae / Sinorhizobium/Ensifer group / Sinorhizobium. /	3	2
Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Streptomycineae / Streptomycetaceae / Streptomyces. /	3	0
Yersinia pestis D106004 plasmid pCD1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	3	0
Yersinia pestis D182038 plasmid pCD1	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Yersinia. /	3	0
Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB03	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	3	0
Acinetobacter baumannii BJAB07104 plasmid p1BJAB07104	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Acinetobacter / Acinetobacter calcoaceticus/baumannii complex. /	3	0
Acinetobacter baumannii BJAB0868 plasmid p2BJAB0868	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Moraxellaceae / Acinetobacter / Acinetobacter calcoaceticus/baumannii complex. /	3	0
Anabaena cylindrica PCC 7122 plasmid pANACY.01	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Anabaena. /	3	0
Anabaena cylindrica PCC 7122 plasmid pANACY.04	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Anabaena. /	3	0
Arthrobacter sp. Rue61a plasmid pAL1	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Micrococcineae / Micrococcaceae / Arthrobacter. /	3	2
Bacillus thuringiensis Bt407 plasmid BTB_78p	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Bacillus thuringiensis HD-771 plasmid p04	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Bacillus thuringiensis MC28 plasmid pMC8	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-68	Bacteria / Firmicutes / Bacilli / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	3	0
Calothrix sp. PCC 6303 plasmid pCAL6303.01	Bacteria / Cyanobacteria / Nostocales / Rivulariaceae / Calothrix. /	3	0
Calothrix sp. PCC 6303 plasmid pCAL6303.02	Bacteria / Cyanobacteria / Nostocales / Rivulariaceae / Calothrix. /	3	0
Calothrix sp. PCC 6303 plasmid pCAL6303.03	Bacteria / Cyanobacteria / Nostocales / Rivulariaceae / Calothrix. /	3	0
Candidatus Mycoplasma haemominutum Birmingham 1	Bacteria / Tenericutes / Mollicutes / Mycoplasmataceae / Mycoplasma. /	3	1
Candidatus Profftella armatura	Bacteria / Proteobacteria / Betaproteobacteria / Candidatus Profftella. /	3	0
Candidatus Uzinura diaspidicola str. ASNER	Bacteria / Bacteroidetes / Flavobacteriia / Flavobacteriales / Candidatus Uzinura. /	3	0
Cronobacter sakazakii SP291 plasmid pSP291-2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Cronobacter. /	3	0
Cycloclasticus zancles 7-ME plasmid p7ME01	Bacteria / Proteobacteria / Gammaproteobacteria / Thiotrichales / Piscirickettsiaceae / Cycloclasticus. /	3	0
Emticicia oligotrophica DSM 17448 plasmid pEMTOL03	Bacteria / Bacteroidetes / Cytophagia / Cytophagales / Cytophagaceae / Emticicia. /	3	0
Enterococcus faecium Aus0085 plasmid p2	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	3	0
Enterococcus faecium Aus0085 plasmid p3	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	3	0
Enterococcus hirae ATCC 9790 plasmid pTG9790	Bacteria / Firmicutes / Bacilli / Lactobacillales / Enterococcaceae / Enterococcus. /	3	0
Escherichia coli O104:H4 str. 2011C-3493 plasmid pESBL-EA11	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	3	0
Gordonia sp. KTR9 plasmid pGKT2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Gordoniaceae / Gordonia. /	3	0
Lactobacillus brevis KB290 plasmid pKB290-3	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	1
Lactobacillus plantarum 16 plasmid Lp16D	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum 16 plasmid Lp16G	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum 16 plasmid Lp16H	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus plantarum ZJ316 plasmid pLP-ZJ102	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Lactobacillus reuteri I5007 plasmid pLRI02	Bacteria / Firmicutes / Bacilli / Lactobacillales / Lactobacillaceae / Lactobacillus. /	3	0
Leuconostoc carnosum JB16 plasmid pKLC1	Bacteria / Firmicutes / Bacilli / Lactobacillales / Leuconostoc. /	3	0
Mycobacterium abscessus subsp. bolletii 50594 plasmid 2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Corynebacterineae / Mycobacteriaceae / Mycobacterium / Mycobacterium abscessus. /	3	0
Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04	Bacteria / Cyanobacteria / Oscillatoriophycideae / Oscillatoriales / Oscillatoria. /	3	0
Pseudomonas putida ND6 plasmid pND6-2	Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Pseudomonadaceae / Pseudomonas. /	3	0
Salmonella enterica subsp. enterica serovar Javiana str. plasmid pCFSAN001992_1	CFSAN001992 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	3	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	3	0
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	3	1
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	3	1
Salmonella enterica subsp. enterica serovar Weltevreden str.	2007-60-3289-1 Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Salmonella. /	3	0
Staphylococcus aureus subsp. aureus ST228 plasmid pI1T1	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	3	5
Staphylococcus aureus subsp. aureus ST228 plasmid pI2T2	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	3	5
Staphylococcus aureus subsp. aureus ST228 plasmid pI3T3	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	3	5
Staphylococcus aureus subsp. aureus ST228 plasmid pI4T8	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	3	5
Staphylococcus aureus subsp. aureus ST228 plasmid pI6T6	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	3	5
Staphylococcus aureus subsp. aureus ST228 plasmid pI7S6	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	3	4
Staphylococcus aureus subsp. aureus ST228 plasmid pI8T7	Bacteria / Firmicutes / Bacilli / Bacillales / Staphylococcus. /	3	4
Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH2	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Streptomycineae / Streptomycetaceae / Streptomyces. /	3	0
Synechococcus sp. PCC 7502 plasmid pSYN7502.01	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Synechococcus. /	3	0
Synechocystis sp. PCC 6803 plasmid pSYSA_M	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Synechocystis. /	3	0
Synechocystis sp. PCC 6803 plasmid pSYSG_M	Bacteria / Cyanobacteria / Oscillatoriophycideae / Chroococcales / Synechocystis. /	3	0
Thermobacillus composti KWC4 plasmid pTHECO01	Bacteria / Firmicutes / Bacilli / Bacillales / Paenibacillaceae / Thermobacillus. /	3	1
Zymomonas mobilis subsp. mobilis ATCC 29191 plasmid pZZ6.02	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	3	0
Carnobacterium sp. WN1359 plasmid pWNCR47	Bacteria / Firmicutes / Bacilli / Lactobacillales / Carnobacteriaceae / Carnobacterium. /	3	0
Vibrio campbellii ATCC BAA-1116 plasmid unnamed	Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. /	3	0
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	3	0
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	3	0
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed	Bacteria / Proteobacteria / Alphaproteobacteria / Sphingomonadales / Sphingomonadaceae / Zymomonas. /	3	0
Acidiphilium cryptum JF-5 plasmid pACRY03	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acidiphilium. /	4	1
Acidiphilium cryptum JF-5 plasmid pACRY04	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Acidiphilium. /	4	0
Bacillus anthracis str. A0248 plasmid pXO2	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	4	0
Bacillus anthracis str. Ames Ancestor plasmid pXO2	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	4	1
Bacillus cereus AH187 plasmid pAH187_45	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	4	0
Bacillus cereus G9842 plasmid pG9842_140	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	4	0
Bacillus weihenstephanensis KBAB4 plasmid pBWB404	Bacteria / Firmicutes / Bacillales / Bacillaceae / Bacillus / Bacillus cereus group. /	4	0
Burkholderia glumae BGR1 plasmid bglu_3p	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Burkholderia. /	4	1
Burkholderia glumae BGR1 plasmid bglu_4p	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Burkholderia. /	4	0
Burkholderia vietnamiensis G4 plasmid pBVIE04	Bacteria / Proteobacteria / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Burkholderia / Burkholderia cepacia complex. /	4	0
Citrobacter rodentium ICC168 plasmid pCROD2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Citrobacter. /	4	0
Clavibacter michiganensis subsp. sepedonicus plasmid pCS1	Bacteria / Actinobacteria / Actinobacteridae / Actinomycetales / Micrococcineae / Microbacteriaceae / Clavibacter. /	4	1
Cronobacter turicensis z3032 plasmid pCTU3	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Cronobacter. /	4	0
Cyanothece sp. PCC 7424 plasmid pP742402	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	4	0
Cyanothece sp. PCC 8801 plasmid pP880101	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	4	0
Cyanothece sp. PCC 8802 plasmid pP880201	Bacteria / Cyanobacteria / Chroococcales / Cyanothece. /	4	0
Deinococcus proteolyticus MRP plasmid pDEIPR02	Bacteria / Deinococcus-Thermus / Deinococci / Deinococcales / Deinococcaceae / Deinococcus. /	4	0
Deinococcus proteolyticus MRP plasmid pDEIPR03	Bacteria / Deinococcus-Thermus / Deinococci / Deinococcales / Deinococcaceae / Deinococcus. /	4	0
Desulfovibrio magneticus RS-1 plasmid pDMC1	Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. /	4	0
Dinoroseobacter shibae DFL 12 plasmid pDSHI04	Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Dinoroseobacter. /	4	0
Erwinia pyrifoliae Ep1/96 plasmid pEP36	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	4	0
Erwinia tasmaniensis Et1/99 plasmid pET46	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	4	0
Erwinia tasmaniensis Et1/99 plasmid pET49	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia. /	4	0
Escherichia coli E24377A plasmid pETEC_74	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	4	0
Escherichia coli E24377A plasmid pETEC_80	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	4	0
Escherichia coli O127:H6 str. E2348/69 plasmid pMAR2	Bacteria / Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Escherichia. /	4	0
Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY01	Bacteria / Bacteroidetes / Sphingobacteriia / Sphingobacteriales / Saprospiraceae / Haliscomenobacter. /	4	0
Lactobacillus plantarum WCFS1 plasmid pWCFS103	Bacteria / Firmicutes / Lactobacillales / Lactobacillaceae / Lactobacillus. /	4	0
Lactococcus lactis subsp. cremoris SK11 plasmid 3	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	4	1
Lactococcus lactis subsp. cremoris SK11 plasmid 4	Bacteria / Firmicutes / Lactobacillales / Streptococcaceae / Lactococcus. /	4	1
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) plasmid p74	Bacteria / Spirochaetes / Spirochaetales / Leptospiraceae / Leptospira. /	4	0
Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) plasmid p74	Bacteria / Spirochaetes / Spirochaetales / Leptospiraceae / Leptospira. /	4	0
Methylobacterium extorquens AM1 plasmid p2META1	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	4	2
Methylobacterium extorquens AM1 plasmid p3META1	Bacteria / Proteobacteria / Alphaproteobacteria / Rhizobiales / Methylobacteriaceae / Methylobacterium. /	4	0
Mycoplasma hominis ATCC 23114	Bacteria / Tenericutes / Mollicutes / Mycoplasmataceae / Mycoplasma. /	4	4
Mycoplasma suis KI3806	Bacteria / Tenericutes / Mollicutes / Mycoplasmataceae / Mycoplasma. /	4	0
Mycoplasma suis str. Illinois	Bacteria / Tenericutes / Mollicutes / Mycoplasmataceae / Mycoplasma. /	4	0
Nitrosomonas eutropha C91 plasmid Plasmid2	Bacteria / Proteobacteria / Betaproteobacteria / Nitrosomonadales / Nitrosomonadaceae / Nitrosomonas. /	4	0
Nostoc punctiforme PCC 73102 (Nostoc punctiforme ATCC 29133) plasmid pNPUN03	Bacteria / Cyanobacteria / Nostocales / Nostocaceae / Nostoc. /	4	0
Oscillibacter valericigenes Sjm18-20 plasmid pOBV01	Bacteria / Firmicutes / Clostridia / Clostridiales /